Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AC007563.3-201ENST00000433233 371 ntBASIC7.48□□□□□ -1.21
LIG1P18858 PTGES3P1-201ENST00000439531 483 ntBASIC7.48□□□□□ -1.21
LIG1P18858 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC7.48□□□□□ -1.21
LIG1P18858 HMGB3P6-201ENST00000444896 598 ntBASIC7.48□□□□□ -1.21
LIG1P18858 TAF9P1-201ENST00000445421 515 ntBASIC7.48□□□□□ -1.21
LIG1P18858 AL929288.2-201ENST00000446368 407 ntBASIC7.48□□□□□ -1.21
LIG1P18858 RPL31P11-202ENST00000454082 372 ntBASIC7.48□□□□□ -1.21
LIG1P18858 TAF9P2-201ENST00000454958 515 ntBASIC7.48□□□□□ -1.21
LIG1P18858 RNU6-599P-201ENST00000459383 107 ntBASIC7.48□□□□□ -1.21
LIG1P18858 RNU6-1193P-201ENST00000459461 107 ntBASIC7.48□□□□□ -1.21
LIG1P18858 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC7.48□□□□□ -1.21
LIG1P18858 RPL7AP23-201ENST00000482625 776 ntBASIC7.48□□□□□ -1.21
LIG1P18858 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC7.48□□□□□ -1.21
LIG1P18858 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.48□□□□□ -1.21
LIG1P18858 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC7.48□□□□□ -1.21
LIG1P18858 AC093890.1-201ENST00000502554 540 ntBASIC7.48□□□□□ -1.21
LIG1P18858 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC7.48□□□□□ -1.21
LIG1P18858 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC7.48□□□□□ -1.21
LIG1P18858 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC7.48□□□□□ -1.21
LIG1P18858 OR52H2P-201ENST00000514607 902 ntBASIC7.48□□□□□ -1.21
LIG1P18858 SNRPCP6-201ENST00000528310 210 ntBASIC7.48□□□□□ -1.21
LIG1P18858 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC7.48□□□□□ -1.21
LIG1P18858 AL445383.1-201ENST00000554689 874 ntBASIC7.48□□□□□ -1.21
LIG1P18858 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC7.48□□□□□ -1.21
LIG1P18858 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.48□□□□□ -1.21
LIG1P18858 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
LIG1P18858 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LIG1P18858 AC036176.3-201ENST00000602456 418 ntBASIC7.48□□□□□ -1.21
LIG1P18858 AC078795.2-201ENST00000602835 1252 ntBASIC7.48□□□□□ -1.21
LIG1P18858 AP000255.1-201ENST00000610276 676 ntBASIC7.48□□□□□ -1.21
LIG1P18858 U6.42-201ENST00000618440 107 ntBASIC7.48□□□□□ -1.21
LIG1P18858 RNU6-368P-201ENST00000620928 107 ntBASIC7.48□□□□□ -1.21
LIG1P18858 MIR6813-201ENST00000621638 56 ntBASIC7.48□□□□□ -1.21
LIG1P18858 RNU6-538P-201ENST00000622329 107 ntBASIC7.48□□□□□ -1.21
LIG1P18858 AC114546.4-201ENST00000624413 369 ntBASIC7.48□□□□□ -1.21
LIG1P18858 AC061999.1-201ENST00000624454 177 ntBASIC7.48□□□□□ -1.21
LIG1P18858 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC7.48□□□□□ -1.21
LIG1P18858 OR8A1-204ENST00000642111 1145 ntBASIC7.48□□□□□ -1.21
LIG1P18858 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LIG1P18858 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LIG1P18858 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.48□□□□□ -1.21
LIG1P18858 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
LIG1P18858 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
LIG1P18858 EEF1A1P30-201ENST00000429708 1315 ntBASIC7.48□□□□□ -1.21
LIG1P18858 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LIG1P18858 DDX18P6-201ENST00000450119 1997 ntBASIC7.48□□□□□ -1.21
LIG1P18858 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LIG1P18858 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC7.47□□□□□ -1.21
LIG1P18858 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.47□□□□□ -1.21
LIG1P18858 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LIG1P18858 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LIG1P18858 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LIG1P18858 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC7.47□□□□□ -1.21
LIG1P18858 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
LIG1P18858 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LIG1P18858 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LIG1P18858 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LIG1P18858 FAM133CP-201ENST00000332869 704 ntBASIC7.47□□□□□ -1.21
LIG1P18858 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
LIG1P18858 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LIG1P18858 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LIG1P18858 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
LIG1P18858 SNORD56.4-201ENST00000363883 71 ntBASIC7.47□□□□□ -1.21
LIG1P18858 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LIG1P18858 RNU6-517P-201ENST00000384362 110 ntBASIC7.47□□□□□ -1.21
LIG1P18858 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LIG1P18858 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC7.47□□□□□ -1.21
LIG1P18858 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC7.47□□□□□ -1.21
LIG1P18858 ELOCP17-201ENST00000414751 326 ntBASIC7.47□□□□□ -1.21
LIG1P18858 EIF4A1P1-201ENST00000420241 934 ntBASIC7.47□□□□□ -1.21
LIG1P18858 AC019178.2-201ENST00000423595 505 ntBASIC7.47□□□□□ -1.21
LIG1P18858 AHCYP8-201ENST00000425108 209 ntBASIC7.47□□□□□ -1.21
LIG1P18858 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC7.47□□□□□ -1.21
LIG1P18858 MTATP6P23-201ENST00000440153 476 ntBASIC7.47□□□□□ -1.21
LIG1P18858 AC097262.1-201ENST00000452559 548 ntBASIC7.47□□□□□ -1.21
LIG1P18858 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC7.47□□□□□ -1.21
LIG1P18858 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
LIG1P18858 RN7SL165P-201ENST00000477476 291 ntBASIC7.47□□□□□ -1.21
LIG1P18858 RPS4XP17-201ENST00000479057 754 ntBASIC7.47□□□□□ -1.21
LIG1P18858 RPL5P33-201ENST00000487833 905 ntBASIC7.47□□□□□ -1.21
LIG1P18858 EIF4E2P2-201ENST00000492033 736 ntBASIC7.47□□□□□ -1.21
LIG1P18858 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC7.47□□□□□ -1.21
LIG1P18858 AK4P6-201ENST00000505168 528 ntBASIC7.47□□□□□ -1.21
LIG1P18858 AC108475.1-201ENST00000507880 950 ntBASIC7.47□□□□□ -1.21
LIG1P18858 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC7.47□□□□□ -1.21
LIG1P18858 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LIG1P18858 RNU6-319P-201ENST00000516025 108 ntBASIC7.47□□□□□ -1.21
LIG1P18858 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC7.47□□□□□ -1.21
LIG1P18858 AC020937.1-201ENST00000519677 1013 ntBASIC7.47□□□□□ -1.21
LIG1P18858 AP005639.1-201ENST00000526939 192 ntBASIC7.47□□□□□ -1.21
LIG1P18858 AC090115.2-201ENST00000548060 883 ntBASIC7.47□□□□□ -1.21
LIG1P18858 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC7.47□□□□□ -1.21
LIG1P18858 GNG2-203ENST00000553432 577 ntTSL 4 BASIC7.47□□□□□ -1.21
LIG1P18858 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC7.47□□□□□ -1.21
LIG1P18858 AC090888.3-201ENST00000558917 509 ntBASIC7.47□□□□□ -1.21
LIG1P18858 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC7.47□□□□□ -1.21
LIG1P18858 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC7.47□□□□□ -1.21
LIG1P18858 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC7.47□□□□□ -1.21
LIG1P18858 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.47□□□□□ -1.21
LIG1P18858 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms