Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC4.74□□□□□ -1.65
ATF1P18846 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC4.74□□□□□ -1.65
ATF1P18846 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.74□□□□□ -1.65
ATF1P18846 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.74□□□□□ -1.65
ATF1P18846 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ATF1P18846 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.74□□□□□ -1.65
ATF1P18846 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC4.74□□□□□ -1.65
ATF1P18846 AL139041.1-201ENST00000605480 610 ntBASIC4.74□□□□□ -1.65
ATF1P18846 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.74□□□□□ -1.65
ATF1P18846 AC244107.2-201ENST00000611773 76 ntBASIC4.74□□□□□ -1.65
ATF1P18846 AC103703.1-201ENST00000634783 663 ntBASIC4.74□□□□□ -1.65
ATF1P18846 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
ATF1P18846 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.74□□□□□ -1.65
ATF1P18846 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ATF1P18846 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ATF1P18846 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
ATF1P18846 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ATF1P18846 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ATF1P18846 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ATF1P18846 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ATF1P18846 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.73□□□□□ -1.65
ATF1P18846 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
ATF1P18846 MRE11P1-201ENST00000464884 2127 ntBASIC4.73□□□□□ -1.65
ATF1P18846 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ATF1P18846 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
ATF1P18846 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.73□□□□□ -1.65
ATF1P18846 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.73□□□□□ -1.65
ATF1P18846 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ATF1P18846 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
ATF1P18846 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ATF1P18846 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
ATF1P18846 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
ATF1P18846 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ATF1P18846 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.73□□□□□ -1.65
ATF1P18846 RNA5SP131-201ENST00000365452 119 ntBASIC4.73□□□□□ -1.65
ATF1P18846 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.73□□□□□ -1.65
ATF1P18846 MIR551A-201ENST00000385042 96 ntBASIC4.73□□□□□ -1.65
ATF1P18846 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.73□□□□□ -1.65
ATF1P18846 NAP1L4P3-201ENST00000432820 1147 ntBASIC4.73□□□□□ -1.65
ATF1P18846 AL161722.1-201ENST00000446972 1032 ntBASIC4.73□□□□□ -1.65
ATF1P18846 AL157385.1-201ENST00000446973 268 ntBASIC4.73□□□□□ -1.65
ATF1P18846 AP006222.1-205ENST00000450734 457 ntBASIC4.73□□□□□ -1.65
ATF1P18846 CTSLP6-201ENST00000458273 1002 ntBASIC4.73□□□□□ -1.65
ATF1P18846 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.73□□□□□ -1.65
ATF1P18846 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.73□□□□□ -1.65
ATF1P18846 RNU6-615P-201ENST00000516065 106 ntBASIC4.73□□□□□ -1.65
ATF1P18846 Vault.2-201ENST00000516519 98 ntBASIC4.73□□□□□ -1.65
ATF1P18846 AC060775.1-201ENST00000518241 520 ntBASIC4.73□□□□□ -1.65
ATF1P18846 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC4.73□□□□□ -1.65
ATF1P18846 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
ATF1P18846 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.73□□□□□ -1.65
ATF1P18846 AC068993.1-201ENST00000546724 589 ntBASIC4.73□□□□□ -1.65
ATF1P18846 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ATF1P18846 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.73□□□□□ -1.65
ATF1P18846 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.73□□□□□ -1.65
ATF1P18846 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.73□□□□□ -1.65
ATF1P18846 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.73□□□□□ -1.65
ATF1P18846 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.73□□□□□ -1.65
ATF1P18846 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ATF1P18846 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ATF1P18846 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ATF1P18846 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ATF1P18846 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ATF1P18846 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.73□□□□□ -1.65
ATF1P18846 AC027279.1-201ENST00000568885 4284 ntBASIC4.73□□□□□ -1.65
ATF1P18846 AC025574.1-201ENST00000554784 1653 ntBASIC4.73□□□□□ -1.65
ATF1P18846 AC100778.3-201ENST00000580060 1750 ntBASIC4.73□□□□□ -1.65
ATF1P18846 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.73□□□□□ -1.65
ATF1P18846 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
ATF1P18846 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
ATF1P18846 IFIT1P1-201ENST00000400497 1449 ntBASIC4.72□□□□□ -1.65
ATF1P18846 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
ATF1P18846 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ATF1P18846 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ATF1P18846 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.72□□□□□ -1.65
ATF1P18846 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ATF1P18846 SMG1P7-201ENST00000565246 2704 ntBASIC4.72□□□□□ -1.65
ATF1P18846 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
ATF1P18846 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ATF1P18846 HMGB1P20-201ENST00000402555 677 ntBASIC4.72□□□□□ -1.65
ATF1P18846 RPS3AP2-201ENST00000407190 754 ntBASIC4.72□□□□□ -1.65
ATF1P18846 CBX1P3-201ENST00000413296 527 ntBASIC4.72□□□□□ -1.65
ATF1P18846 AC113412.1-201ENST00000425840 504 ntBASIC4.72□□□□□ -1.65
ATF1P18846 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.72□□□□□ -1.65
ATF1P18846 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC4.72□□□□□ -1.65
ATF1P18846 AL450023.1-201ENST00000450868 751 ntBASIC4.72□□□□□ -1.65
ATF1P18846 YRDCP3-201ENST00000456507 480 ntBASIC4.72□□□□□ -1.65
ATF1P18846 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.72□□□□□ -1.65
ATF1P18846 AP002884.1-201ENST00000479691 655 ntBASIC4.72□□□□□ -1.65
ATF1P18846 RN7SL273P-201ENST00000481561 299 ntBASIC4.72□□□□□ -1.65
ATF1P18846 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC4.72□□□□□ -1.65
ATF1P18846 NIFKP7-201ENST00000503365 834 ntBASIC4.72□□□□□ -1.65
ATF1P18846 AC138409.2-202ENST00000507274 458 ntBASIC4.72□□□□□ -1.65
ATF1P18846 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.72□□□□□ -1.65
ATF1P18846 RNU6-513P-201ENST00000516104 104 ntBASIC4.72□□□□□ -1.65
ATF1P18846 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC4.72□□□□□ -1.65
ATF1P18846 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.72□□□□□ -1.65
ATF1P18846 AP006245.2-201ENST00000522004 300 ntBASIC4.72□□□□□ -1.65
ATF1P18846 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.72□□□□□ -1.65
ATF1P18846 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms