Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 RPS10P18-201ENST00000442662 495 ntBASIC5.15□□□□□ -1.59
SDC1P18827 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SDC1P18827 AC092754.1-201ENST00000472975 479 ntBASIC5.15□□□□□ -1.59
SDC1P18827 RN7SL741P-201ENST00000482473 289 ntBASIC5.15□□□□□ -1.59
SDC1P18827 RPS12P31-201ENST00000491419 398 ntBASIC5.15□□□□□ -1.59
SDC1P18827 AC091917.2-201ENST00000505002 744 ntBASIC5.15□□□□□ -1.59
SDC1P18827 AP001960.1-201ENST00000506494 658 ntBASIC5.15□□□□□ -1.59
SDC1P18827 AC138866.2-201ENST00000508650 584 ntBASIC5.15□□□□□ -1.59
SDC1P18827 AC109481.1-201ENST00000509173 282 ntBASIC5.15□□□□□ -1.59
SDC1P18827 AC098976.1-201ENST00000513014 541 ntBASIC5.15□□□□□ -1.59
SDC1P18827 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.15□□□□□ -1.59
SDC1P18827 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.15□□□□□ -1.59
SDC1P18827 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.15□□□□□ -1.59
SDC1P18827 NMNAT1P5-201ENST00000559657 841 ntBASIC5.15□□□□□ -1.59
SDC1P18827 AC016839.1-201ENST00000578162 867 ntBASIC5.15□□□□□ -1.59
SDC1P18827 MTCYBP13-201ENST00000578634 1093 ntBASIC5.15□□□□□ -1.59
SDC1P18827 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.15□□□□□ -1.59
SDC1P18827 AC008115.3-201ENST00000614874 549 ntBASIC5.15□□□□□ -1.59
SDC1P18827 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.15□□□□□ -1.59
SDC1P18827 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
SDC1P18827 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
SDC1P18827 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
SDC1P18827 AC079298.1-201ENST00000625026 1619 ntBASIC5.15□□□□□ -1.59
SDC1P18827 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
SDC1P18827 AC010266.2-201ENST00000564741 3255 ntBASIC5.15□□□□□ -1.59
SDC1P18827 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
SDC1P18827 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.15□□□□□ -1.59
SDC1P18827 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.15□□□□□ -1.59
SDC1P18827 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.15□□□□□ -1.59
SDC1P18827 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SDC1P18827 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SDC1P18827 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SDC1P18827 MAPK10-328ENST00000641553 4009 ntBASIC5.14□□□□□ -1.59
SDC1P18827 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.14□□□□□ -1.59
SDC1P18827 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
SDC1P18827 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SDC1P18827 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SDC1P18827 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SDC1P18827 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
SDC1P18827 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SDC1P18827 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
SDC1P18827 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.14□□□□□ -1.59
SDC1P18827 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
SDC1P18827 AC092376.2-201ENST00000622621 4116 ntBASIC5.14□□□□□ -1.59
SDC1P18827 AC107977.1-201ENST00000355745 939 ntBASIC5.14□□□□□ -1.59
SDC1P18827 AC023490.2-201ENST00000359859 470 ntBASIC5.14□□□□□ -1.59
SDC1P18827 RN7SKP292-201ENST00000365522 317 ntBASIC5.14□□□□□ -1.59
SDC1P18827 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SDC1P18827 BMS1P17-202ENST00000416720 316 ntBASIC5.14□□□□□ -1.59
SDC1P18827 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.14□□□□□ -1.59
SDC1P18827 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SDC1P18827 AC124944.2-201ENST00000429866 1242 ntBASIC5.14□□□□□ -1.59
SDC1P18827 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.14□□□□□ -1.59
SDC1P18827 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.14□□□□□ -1.59
SDC1P18827 AL672138.1-201ENST00000450604 1015 ntBASIC5.14□□□□□ -1.59
SDC1P18827 OR52E3P-201ENST00000452083 936 ntBASIC5.14□□□□□ -1.59
SDC1P18827 AC093827.1-201ENST00000480094 861 ntBASIC5.14□□□□□ -1.59
SDC1P18827 RPL15P21-201ENST00000495592 567 ntBASIC5.14□□□□□ -1.59
SDC1P18827 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.14□□□□□ -1.59
SDC1P18827 AC016559.2-201ENST00000510759 359 ntBASIC5.14□□□□□ -1.59
SDC1P18827 RNU6-1334P-201ENST00000516032 105 ntBASIC5.14□□□□□ -1.59
SDC1P18827 AL049872.1-201ENST00000556323 322 ntBASIC5.14□□□□□ -1.59
SDC1P18827 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.14□□□□□ -1.59
SDC1P18827 RN7SL356P-201ENST00000582228 248 ntBASIC5.14□□□□□ -1.59
SDC1P18827 AC010615.3-201ENST00000597319 394 ntBASIC5.14□□□□□ -1.59
SDC1P18827 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.14□□□□□ -1.59
SDC1P18827 AC100767.2-201ENST00000604840 693 ntBASIC5.14□□□□□ -1.59
SDC1P18827 AC092944.2-201ENST00000605443 889 ntBASIC5.14□□□□□ -1.59
SDC1P18827 AL359742.1-201ENST00000622497 540 ntBASIC5.14□□□□□ -1.59
SDC1P18827 AL353684.1-201ENST00000622677 1120 ntBASIC5.14□□□□□ -1.59
SDC1P18827 AP003400.3-201ENST00000624904 346 ntBASIC5.14□□□□□ -1.59
SDC1P18827 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.14□□□□□ -1.59
SDC1P18827 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SDC1P18827 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SDC1P18827 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SDC1P18827 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SDC1P18827 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SDC1P18827 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SDC1P18827 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SDC1P18827 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SDC1P18827 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
SDC1P18827 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
SDC1P18827 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.13□□□□□ -1.59
SDC1P18827 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.13□□□□□ -1.59
SDC1P18827 AL034549.2-201ENST00000618285 3373 ntBASIC5.13□□□□□ -1.59
SDC1P18827 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.13□□□□□ -1.59
SDC1P18827 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
SDC1P18827 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.13□□□□□ -1.59
SDC1P18827 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SDC1P18827 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SDC1P18827 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.13□□□□□ -1.59
SDC1P18827 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.13□□□□□ -1.59
SDC1P18827 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SDC1P18827 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SDC1P18827 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SDC1P18827 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SDC1P18827 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SDC1P18827 U3.7-201ENST00000363668 216 ntBASIC5.13□□□□□ -1.59
SDC1P18827 RN7SKP81-201ENST00000365603 331 ntBASIC5.13□□□□□ -1.59
SDC1P18827 RNU4-2-201ENST00000365668 141 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms