Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.75□□□□□ -1.65
CTLA4P16410 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CTLA4P16410 RNA5SP234-201ENST00000363916 119 ntBASIC4.75□□□□□ -1.65
CTLA4P16410 RN7SKP186-201ENST00000365371 303 ntBASIC4.75□□□□□ -1.65
CTLA4P16410 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.75□□□□□ -1.65
CTLA4P16410 MIR1282-201ENST00000408865 101 ntBASIC4.75□□□□□ -1.65
CTLA4P16410 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.75□□□□□ -1.65
CTLA4P16410 AL390119.1-201ENST00000440329 312 ntBASIC4.75□□□□□ -1.65
CTLA4P16410 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.75□□□□□ -1.65
CTLA4P16410 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.75□□□□□ -1.65
CTLA4P16410 AC058823.1-201ENST00000485315 474 ntBASIC4.75□□□□□ -1.65
CTLA4P16410 RPS24P16-201ENST00000497294 392 ntBASIC4.75□□□□□ -1.65
CTLA4P16410 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.75□□□□□ -1.65
CTLA4P16410 AC098976.1-201ENST00000513014 541 ntBASIC4.75□□□□□ -1.65
CTLA4P16410 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.75□□□□□ -1.65
CTLA4P16410 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.75□□□□□ -1.65
CTLA4P16410 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
CTLA4P16410 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.75□□□□□ -1.65
CTLA4P16410 NMNAT1P5-201ENST00000559657 841 ntBASIC4.75□□□□□ -1.65
CTLA4P16410 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.75□□□□□ -1.65
CTLA4P16410 MTCYBP13-201ENST00000578634 1093 ntBASIC4.75□□□□□ -1.65
CTLA4P16410 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.75□□□□□ -1.65
CTLA4P16410 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.75□□□□□ -1.65
CTLA4P16410 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.75□□□□□ -1.65
CTLA4P16410 AC000068.2-201ENST00000608816 460 ntBASIC4.75□□□□□ -1.65
CTLA4P16410 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CTLA4P16410 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CTLA4P16410 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CTLA4P16410 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
CTLA4P16410 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.75□□□□□ -1.65
CTLA4P16410 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CTLA4P16410 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CTLA4P16410 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CTLA4P16410 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.75□□□□□ -1.65
CTLA4P16410 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CTLA4P16410 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
CTLA4P16410 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CTLA4P16410 NR1H5P-201ENST00000452683 1377 ntBASIC4.75□□□□□ -1.65
CTLA4P16410 AC002525.1-201ENST00000624392 1622 ntBASIC4.75□□□□□ -1.65
CTLA4P16410 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CTLA4P16410 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CTLA4P16410 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CTLA4P16410 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.74□□□□□ -1.65
CTLA4P16410 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CTLA4P16410 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CTLA4P16410 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC4.74□□□□□ -1.65
CTLA4P16410 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.74□□□□□ -1.65
CTLA4P16410 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.74□□□□□ -1.65
CTLA4P16410 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.74□□□□□ -1.65
CTLA4P16410 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.74□□□□□ -1.65
CTLA4P16410 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.74□□□□□ -1.65
CTLA4P16410 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CTLA4P16410 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.74□□□□□ -1.65
CTLA4P16410 MIR133B-201ENST00000362210 119 ntBASIC4.74□□□□□ -1.65
CTLA4P16410 AL133388.1-201ENST00000404509 287 ntBASIC4.74□□□□□ -1.65
CTLA4P16410 SDHDP6-201ENST00000414693 480 ntBASIC4.74□□□□□ -1.65
CTLA4P16410 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.74□□□□□ -1.65
CTLA4P16410 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.74□□□□□ -1.65
CTLA4P16410 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.74□□□□□ -1.65
CTLA4P16410 AC073909.1-201ENST00000447112 999 ntBASIC4.74□□□□□ -1.65
CTLA4P16410 OR52E3P-201ENST00000452083 936 ntBASIC4.74□□□□□ -1.65
CTLA4P16410 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.74□□□□□ -1.65
CTLA4P16410 RANP1-206ENST00000455094 651 ntBASIC4.74□□□□□ -1.65
CTLA4P16410 CBX1P5-201ENST00000475330 559 ntBASIC4.74□□□□□ -1.65
CTLA4P16410 AC090638.1-201ENST00000498296 909 ntBASIC4.74□□□□□ -1.65
CTLA4P16410 AC016559.2-201ENST00000510759 359 ntBASIC4.74□□□□□ -1.65
CTLA4P16410 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.74□□□□□ -1.65
CTLA4P16410 AC027369.5-201ENST00000533838 755 ntBASIC4.74□□□□□ -1.65
CTLA4P16410 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.74□□□□□ -1.65
CTLA4P16410 AC015720.2-201ENST00000567709 334 ntBASIC4.74□□□□□ -1.65
CTLA4P16410 AC005341.1-201ENST00000571086 708 ntBASIC4.74□□□□□ -1.65
CTLA4P16410 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CTLA4P16410 FO393422.1-201ENST00000603908 708 ntBASIC4.74□□□□□ -1.65
CTLA4P16410 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.74□□□□□ -1.65
CTLA4P16410 RN7SL787P-201ENST00000613000 284 ntBASIC4.74□□□□□ -1.65
CTLA4P16410 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CTLA4P16410 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CTLA4P16410 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.74□□□□□ -1.65
CTLA4P16410 MAPK10-328ENST00000641553 4009 ntBASIC4.74□□□□□ -1.65
CTLA4P16410 AC093671.1-201ENST00000624981 2929 ntBASIC4.74□□□□□ -1.65
CTLA4P16410 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CTLA4P16410 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CTLA4P16410 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CTLA4P16410 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CTLA4P16410 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CTLA4P16410 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CTLA4P16410 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CTLA4P16410 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CTLA4P16410 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.73□□□□□ -1.65
CTLA4P16410 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CTLA4P16410 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CTLA4P16410 RNA5SP319-201ENST00000362768 119 ntBASIC4.73□□□□□ -1.65
CTLA4P16410 RNA5SP187-201ENST00000384400 119 ntBASIC4.73□□□□□ -1.65
CTLA4P16410 OR4K12P-201ENST00000406538 961 ntBASIC4.73□□□□□ -1.65
CTLA4P16410 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.73□□□□□ -1.65
CTLA4P16410 RPL12P9-201ENST00000412942 488 ntBASIC4.73□□□□□ -1.65
CTLA4P16410 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.73□□□□□ -1.65
CTLA4P16410 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.73□□□□□ -1.65
CTLA4P16410 AP000281.1-201ENST00000444036 316 ntBASIC4.73□□□□□ -1.65
CTLA4P16410 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms