Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
HLA-DOAP06340 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.69□□□□□ -1.34
HLA-DOAP06340 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC6.69□□□□□ -1.34
HLA-DOAP06340 MTND3P12-201ENST00000559068 328 ntBASIC6.69□□□□□ -1.34
HLA-DOAP06340 AGGF1P7-201ENST00000562369 913 ntBASIC6.69□□□□□ -1.34
HLA-DOAP06340 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.69□□□□□ -1.34
HLA-DOAP06340 MTATP6P24-201ENST00000576835 677 ntBASIC6.69□□□□□ -1.34
HLA-DOAP06340 AC012616.1-201ENST00000600294 197 ntBASIC6.69□□□□□ -1.34
HLA-DOAP06340 MIR6837-201ENST00000620884 64 ntBASIC6.69□□□□□ -1.34
HLA-DOAP06340 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.69□□□□□ -1.34
HLA-DOAP06340 AC010480.1-201ENST00000624823 684 ntBASIC6.69□□□□□ -1.34
HLA-DOAP06340 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HLA-DOAP06340 AC099654.9-201ENST00000637055 678 ntBASIC6.69□□□□□ -1.34
HLA-DOAP06340 AL445984.1-201ENST00000637834 659 ntBASIC6.69□□□□□ -1.34
HLA-DOAP06340 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
HLA-DOAP06340 CASC19-264ENST00000641912 1184 ntBASIC6.69□□□□□ -1.34
HLA-DOAP06340 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.69□□□□□ -1.34
HLA-DOAP06340 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HLA-DOAP06340 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
HLA-DOAP06340 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HLA-DOAP06340 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HLA-DOAP06340 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC6.69□□□□□ -1.34
HLA-DOAP06340 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HLA-DOAP06340 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.69□□□□□ -1.34
HLA-DOAP06340 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
HLA-DOAP06340 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HLA-DOAP06340 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HLA-DOAP06340 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.68□□□□□ -1.34
HLA-DOAP06340 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.68□□□□□ -1.34
HLA-DOAP06340 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.68□□□□□ -1.34
HLA-DOAP06340 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HLA-DOAP06340 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
HLA-DOAP06340 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
HLA-DOAP06340 RN7SKP278-201ENST00000410504 342 ntBASIC6.68□□□□□ -1.34
HLA-DOAP06340 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.68□□□□□ -1.34
HLA-DOAP06340 Z93019.1-201ENST00000416450 973 ntBASIC6.68□□□□□ -1.34
HLA-DOAP06340 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.68□□□□□ -1.34
HLA-DOAP06340 AL606490.1-201ENST00000452266 765 ntBASIC6.68□□□□□ -1.34
HLA-DOAP06340 AC011225.1-201ENST00000457751 369 ntBASIC6.68□□□□□ -1.34
HLA-DOAP06340 COPS8P2-201ENST00000473228 627 ntBASIC6.68□□□□□ -1.34
HLA-DOAP06340 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.68□□□□□ -1.34
HLA-DOAP06340 AC090638.1-201ENST00000498296 909 ntBASIC6.68□□□□□ -1.34
HLA-DOAP06340 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.68□□□□□ -1.34
HLA-DOAP06340 ATG10-AS1-201ENST00000504846 648 ntBASIC6.68□□□□□ -1.34
HLA-DOAP06340 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC6.68□□□□□ -1.34
HLA-DOAP06340 snoU109.5-201ENST00000516231 132 ntBASIC6.68□□□□□ -1.34
HLA-DOAP06340 Y_RNA.717-201ENST00000517106 92 ntBASIC6.68□□□□□ -1.34
HLA-DOAP06340 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC6.68□□□□□ -1.34
HLA-DOAP06340 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.68□□□□□ -1.34
HLA-DOAP06340 AC011270.1-201ENST00000558606 583 ntBASIC6.68□□□□□ -1.34
HLA-DOAP06340 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.68□□□□□ -1.34
HLA-DOAP06340 AC016180.1-201ENST00000567945 403 ntBASIC6.68□□□□□ -1.34
HLA-DOAP06340 MIR4311-201ENST00000580794 100 ntBASIC6.68□□□□□ -1.34
HLA-DOAP06340 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.68□□□□□ -1.34
HLA-DOAP06340 FKBP1AP1-201ENST00000594588 318 ntBASIC6.68□□□□□ -1.34
HLA-DOAP06340 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.68□□□□□ -1.34
HLA-DOAP06340 AL513327.3-201ENST00000602618 469 ntBASIC6.68□□□□□ -1.34
HLA-DOAP06340 AC112220.2-201ENST00000605513 533 ntBASIC6.68□□□□□ -1.34
HLA-DOAP06340 AC140725.3-201ENST00000616193 880 ntBASIC6.68□□□□□ -1.34
HLA-DOAP06340 AC009032.1-201ENST00000617574 431 ntBASIC6.68□□□□□ -1.34
HLA-DOAP06340 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.68□□□□□ -1.34
HLA-DOAP06340 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
HLA-DOAP06340 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HLA-DOAP06340 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
HLA-DOAP06340 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.68□□□□□ -1.34
HLA-DOAP06340 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
HLA-DOAP06340 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
HLA-DOAP06340 TET1P1-201ENST00000426627 2301 ntBASIC6.67□□□□□ -1.34
HLA-DOAP06340 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HLA-DOAP06340 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.67□□□□□ -1.34
HLA-DOAP06340 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
HLA-DOAP06340 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
HLA-DOAP06340 PWAR1-201ENST00000624188 2414 ntBASIC6.67□□□□□ -1.34
HLA-DOAP06340 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.67□□□□□ -1.34
HLA-DOAP06340 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HLA-DOAP06340 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
HLA-DOAP06340 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HLA-DOAP06340 U3.7-201ENST00000363668 216 ntBASIC6.67□□□□□ -1.34
HLA-DOAP06340 MIR122-201ENST00000385044 85 ntBASIC6.67□□□□□ -1.34
HLA-DOAP06340 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HLA-DOAP06340 MIR1286-201ENST00000408112 78 ntBASIC6.67□□□□□ -1.34
HLA-DOAP06340 RNA5SP251-201ENST00000410614 137 ntBASIC6.67□□□□□ -1.34
HLA-DOAP06340 RPS3AP25-201ENST00000411660 793 ntBASIC6.67□□□□□ -1.34
HLA-DOAP06340 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.67□□□□□ -1.34
HLA-DOAP06340 AC068138.1-201ENST00000412635 217 ntBASIC6.67□□□□□ -1.34
HLA-DOAP06340 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC6.67□□□□□ -1.34
HLA-DOAP06340 HMGN1P5-201ENST00000448591 263 ntBASIC6.67□□□□□ -1.34
HLA-DOAP06340 OR6C72P-201ENST00000451403 892 ntBASIC6.67□□□□□ -1.34
HLA-DOAP06340 MTND2P30-201ENST00000456663 382 ntBASIC6.67□□□□□ -1.34
HLA-DOAP06340 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC6.67□□□□□ -1.34
HLA-DOAP06340 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.67□□□□□ -1.34
HLA-DOAP06340 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.67□□□□□ -1.34
HLA-DOAP06340 AC093763.2-201ENST00000505334 1223 ntBASIC6.67□□□□□ -1.34
HLA-DOAP06340 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC6.67□□□□□ -1.34
HLA-DOAP06340 RN7SKP99-201ENST00000517028 307 ntBASIC6.67□□□□□ -1.34
HLA-DOAP06340 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.67□□□□□ -1.34
HLA-DOAP06340 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.67□□□□□ -1.34
HLA-DOAP06340 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC6.67□□□□□ -1.34
HLA-DOAP06340 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.67□□□□□ -1.34
HLA-DOAP06340 AL671309.1-201ENST00000603750 544 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms