Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC106872.5-201ENST00000508856 1416 ntBASIC4.88□□□□□ -1.63
HLA-DPB1P04440 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
HLA-DPB1P04440 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DPB1P04440 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DPB1P04440 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DPB1P04440 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DPB1P04440 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DPB1P04440 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DPB1P04440 MIR375-201ENST00000362103 64 ntBASIC4.87□□□□□ -1.63
HLA-DPB1P04440 SNORA64.1-201ENST00000362600 132 ntBASIC4.87□□□□□ -1.63
HLA-DPB1P04440 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HLA-DPB1P04440 RPS6P23-201ENST00000413224 722 ntBASIC4.87□□□□□ -1.63
HLA-DPB1P04440 AKR1B10P1-201ENST00000425765 942 ntBASIC4.87□□□□□ -1.63
HLA-DPB1P04440 AC127526.2-201ENST00000426436 775 ntBASIC4.87□□□□□ -1.63
HLA-DPB1P04440 CYCSP24-201ENST00000445119 316 ntBASIC4.87□□□□□ -1.63
HLA-DPB1P04440 RPS23P6-201ENST00000466136 431 ntBASIC4.87□□□□□ -1.63
HLA-DPB1P04440 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DPB1P04440 SCARNA20.4-201ENST00000516969 131 ntBASIC4.87□□□□□ -1.63
HLA-DPB1P04440 AC100784.1-201ENST00000522790 310 ntBASIC4.87□□□□□ -1.63
HLA-DPB1P04440 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DPB1P04440 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DPB1P04440 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.87□□□□□ -1.63
HLA-DPB1P04440 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DPB1P04440 MIR6861-201ENST00000618657 64 ntBASIC4.87□□□□□ -1.63
HLA-DPB1P04440 AC087565.3-203ENST00000641018 837 ntBASIC4.87□□□□□ -1.63
HLA-DPB1P04440 AC003973.3-201ENST00000624863 2822 ntBASIC4.87□□□□□ -1.63
HLA-DPB1P04440 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
HLA-DPB1P04440 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
HLA-DPB1P04440 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DPB1P04440 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DPB1P04440 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DPB1P04440 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DPB1P04440 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
HLA-DPB1P04440 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
HLA-DPB1P04440 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DPB1P04440 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DPB1P04440 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.87□□□□□ -1.63
HLA-DPB1P04440 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DPB1P04440 THAP12P5-201ENST00000405864 2275 ntBASIC4.86□□□□□ -1.63
HLA-DPB1P04440 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DPB1P04440 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DPB1P04440 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
HLA-DPB1P04440 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
HLA-DPB1P04440 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.86□□□□□ -1.63
HLA-DPB1P04440 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DPB1P04440 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DPB1P04440 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
HLA-DPB1P04440 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DPB1P04440 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DPB1P04440 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.86□□□□□ -1.63
HLA-DPB1P04440 RNU1-19P-201ENST00000363306 165 ntBASIC4.86□□□□□ -1.63
HLA-DPB1P04440 HMGB1P20-201ENST00000402555 677 ntBASIC4.86□□□□□ -1.63
HLA-DPB1P04440 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
HLA-DPB1P04440 RPS3AP2-201ENST00000407190 754 ntBASIC4.86□□□□□ -1.63
HLA-DPB1P04440 RMRPP5-201ENST00000411156 267 ntBASIC4.86□□□□□ -1.63
HLA-DPB1P04440 AC211486.3-201ENST00000412694 621 ntBASIC4.86□□□□□ -1.63
HLA-DPB1P04440 NPM1P40-201ENST00000412758 733 ntBASIC4.86□□□□□ -1.63
HLA-DPB1P04440 RPL12P9-201ENST00000412942 488 ntBASIC4.86□□□□□ -1.63
HLA-DPB1P04440 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HLA-DPB1P04440 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC4.86□□□□□ -1.63
HLA-DPB1P04440 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DPB1P04440 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.86□□□□□ -1.63
HLA-DPB1P04440 AC090018.1-201ENST00000434369 367 ntBASIC4.86□□□□□ -1.63
HLA-DPB1P04440 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.86□□□□□ -1.63
HLA-DPB1P04440 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.86□□□□□ -1.63
HLA-DPB1P04440 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DPB1P04440 RPS17P15-201ENST00000475609 349 ntBASIC4.86□□□□□ -1.63
HLA-DPB1P04440 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.86□□□□□ -1.63
HLA-DPB1P04440 SNORD46.2-201ENST00000516021 102 ntBASIC4.86□□□□□ -1.63
HLA-DPB1P04440 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC4.86□□□□□ -1.63
HLA-DPB1P04440 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.86□□□□□ -1.63
HLA-DPB1P04440 HMGB1P42-201ENST00000532126 553 ntBASIC4.86□□□□□ -1.63
HLA-DPB1P04440 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DPB1P04440 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.86□□□□□ -1.63
HLA-DPB1P04440 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DPB1P04440 AC079600.1-201ENST00000550326 297 ntBASIC4.86□□□□□ -1.63
HLA-DPB1P04440 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DPB1P04440 AC114947.2-201ENST00000565748 2125 ntBASIC4.86□□□□□ -1.63
HLA-DPB1P04440 AC007066.2-202ENST00000566531 914 ntBASIC4.86□□□□□ -1.63
HLA-DPB1P04440 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DPB1P04440 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.86□□□□□ -1.63
HLA-DPB1P04440 AC027243.2-201ENST00000602530 724 ntBASIC4.86□□□□□ -1.63
HLA-DPB1P04440 AL583832.1-201ENST00000603227 784 ntBASIC4.86□□□□□ -1.63
HLA-DPB1P04440 AC015982.1-201ENST00000608113 465 ntBASIC4.86□□□□□ -1.63
HLA-DPB1P04440 RN7SL544P-201ENST00000617232 284 ntBASIC4.86□□□□□ -1.63
HLA-DPB1P04440 RN7SL763P-201ENST00000620922 284 ntBASIC4.86□□□□□ -1.63
HLA-DPB1P04440 AL390318.1-201ENST00000624564 687 ntBASIC4.86□□□□□ -1.63
HLA-DPB1P04440 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
HLA-DPB1P04440 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HLA-DPB1P04440 AC073869.8-201ENST00000641806 335 ntBASIC4.86□□□□□ -1.63
HLA-DPB1P04440 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DPB1P04440 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.86□□□□□ -1.63
HLA-DPB1P04440 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DPB1P04440 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
HLA-DPB1P04440 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DPB1P04440 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DPB1P04440 AL449283.1-201ENST00000602631 3403 ntBASIC4.85□□□□□ -1.63
HLA-DPB1P04440 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DPB1P04440 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DPB1P04440 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms