Protein–RNA interactions for Protein: P01615

IGKV2D-28, Immunoglobulin kappa variable 2D-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28P01615 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
IGKV2D-28P01615 PDZK1P1-202ENST00000425209 1350 ntBASIC3.6□□□□□ -1.83
IGKV2D-28P01615 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC3.6□□□□□ -1.83
IGKV2D-28P01615 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
IGKV2D-28P01615 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC3.6□□□□□ -1.83
IGKV2D-28P01615 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
IGKV2D-28P01615 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
IGKV2D-28P01615 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC3.6□□□□□ -1.83
IGKV2D-28P01615 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC3.6□□□□□ -1.83
IGKV2D-28P01615 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC3.6□□□□□ -1.83
IGKV2D-28P01615 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC3.6□□□□□ -1.83
IGKV2D-28P01615 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC3.6□□□□□ -1.83
IGKV2D-28P01615 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC3.6□□□□□ -1.83
IGKV2D-28P01615 USP45-204ENST00000369233 2514 ntTSL 5 BASIC3.6□□□□□ -1.83
IGKV2D-28P01615 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
IGKV2D-28P01615 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC3.6□□□□□ -1.83
IGKV2D-28P01615 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
IGKV2D-28P01615 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
IGKV2D-28P01615 ERVFRD-3-201ENST00000578561 1617 ntBASIC3.59□□□□□ -1.83
IGKV2D-28P01615 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
IGKV2D-28P01615 AL450345.1-202ENST00000605741 3881 ntBASIC3.59□□□□□ -1.83
IGKV2D-28P01615 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC3.59□□□□□ -1.83
IGKV2D-28P01615 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
IGKV2D-28P01615 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
IGKV2D-28P01615 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC3.59□□□□□ -1.83
IGKV2D-28P01615 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
IGKV2D-28P01615 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
IGKV2D-28P01615 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
IGKV2D-28P01615 RNU4-23P-201ENST00000362839 140 ntBASIC3.59□□□□□ -1.83
IGKV2D-28P01615 RN7SKP74-201ENST00000362849 309 ntBASIC3.59□□□□□ -1.83
IGKV2D-28P01615 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
IGKV2D-28P01615 RN7SKP86-201ENST00000410454 332 ntBASIC3.59□□□□□ -1.83
IGKV2D-28P01615 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC3.59□□□□□ -1.83
IGKV2D-28P01615 DPPA2P2-201ENST00000418220 897 ntBASIC3.59□□□□□ -1.83
IGKV2D-28P01615 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC3.59□□□□□ -1.83
IGKV2D-28P01615 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
IGKV2D-28P01615 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC3.59□□□□□ -1.83
IGKV2D-28P01615 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
IGKV2D-28P01615 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC3.59□□□□□ -1.83
IGKV2D-28P01615 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC3.59□□□□□ -1.83
IGKV2D-28P01615 AC007679.3-201ENST00000434035 414 ntBASIC3.59□□□□□ -1.83
IGKV2D-28P01615 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
IGKV2D-28P01615 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC3.59□□□□□ -1.83
IGKV2D-28P01615 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
IGKV2D-28P01615 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC3.59□□□□□ -1.83
IGKV2D-28P01615 GEMIN2P1-201ENST00000454246 752 ntBASIC3.59□□□□□ -1.83
IGKV2D-28P01615 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC3.59□□□□□ -1.83
IGKV2D-28P01615 TPT1P1-201ENST00000458495 518 ntBASIC3.59□□□□□ -1.83
IGKV2D-28P01615 RPS4XP12-201ENST00000461747 709 ntBASIC3.59□□□□□ -1.83
IGKV2D-28P01615 AC023194.2-201ENST00000465398 406 ntBASIC3.59□□□□□ -1.83
IGKV2D-28P01615 AC021006.1-201ENST00000489849 553 ntBASIC3.59□□□□□ -1.83
IGKV2D-28P01615 RN7SL568P-201ENST00000493069 298 ntBASIC3.59□□□□□ -1.83
IGKV2D-28P01615 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC3.59□□□□□ -1.83
IGKV2D-28P01615 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC3.59□□□□□ -1.83
IGKV2D-28P01615 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC3.59□□□□□ -1.83
IGKV2D-28P01615 SCARNA18.1-201ENST00000516330 83 ntBASIC3.59□□□□□ -1.83
IGKV2D-28P01615 CETN3-206ENST00000522864 738 ntTSL 3 BASIC3.59□□□□□ -1.83
IGKV2D-28P01615 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC3.59□□□□□ -1.83
IGKV2D-28P01615 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC3.59□□□□□ -1.83
IGKV2D-28P01615 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC3.59□□□□□ -1.83
IGKV2D-28P01615 MTND2P17-201ENST00000550281 688 ntBASIC3.59□□□□□ -1.83
IGKV2D-28P01615 AC006349.1-201ENST00000555526 235 ntBASIC3.59□□□□□ -1.83
IGKV2D-28P01615 AC011270.1-201ENST00000558606 583 ntBASIC3.59□□□□□ -1.83
IGKV2D-28P01615 H3F3BP2-201ENST00000583907 357 ntBASIC3.59□□□□□ -1.83
IGKV2D-28P01615 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC3.59□□□□□ -1.83
IGKV2D-28P01615 AC245128.3-201ENST00000594721 748 ntBASIC3.59□□□□□ -1.83
IGKV2D-28P01615 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.59□□□□□ -1.83
IGKV2D-28P01615 AC104820.1-201ENST00000624183 307 ntBASIC3.59□□□□□ -1.83
IGKV2D-28P01615 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC3.59□□□□□ -1.83
IGKV2D-28P01615 AP000550.3-201ENST00000637734 379 ntBASIC3.59□□□□□ -1.83
IGKV2D-28P01615 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC3.59□□□□□ -1.83
IGKV2D-28P01615 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
IGKV2D-28P01615 UQCRC2P1-201ENST00000417777 1332 ntBASIC3.59□□□□□ -1.83
IGKV2D-28P01615 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
IGKV2D-28P01615 SMG1P4-204ENST00000523028 4131 ntBASIC3.59□□□□□ -1.83
IGKV2D-28P01615 CASC19-248ENST00000641674 1356 ntBASIC3.59□□□□□ -1.83
IGKV2D-28P01615 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
IGKV2D-28P01615 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
IGKV2D-28P01615 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
IGKV2D-28P01615 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
IGKV2D-28P01615 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
IGKV2D-28P01615 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
IGKV2D-28P01615 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
IGKV2D-28P01615 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
IGKV2D-28P01615 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
IGKV2D-28P01615 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
IGKV2D-28P01615 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
IGKV2D-28P01615 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
IGKV2D-28P01615 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
IGKV2D-28P01615 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
IGKV2D-28P01615 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC3.58□□□□□ -1.84
IGKV2D-28P01615 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
IGKV2D-28P01615 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
IGKV2D-28P01615 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
IGKV2D-28P01615 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
IGKV2D-28P01615 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
IGKV2D-28P01615 RNFT1P3-201ENST00000340898 1052 ntBASIC3.58□□□□□ -1.84
IGKV2D-28P01615 CDC123-202ENST00000378900 933 ntTSL 5 BASIC3.58□□□□□ -1.84
IGKV2D-28P01615 RNU6-316P-201ENST00000391027 107 ntBASIC3.58□□□□□ -1.84
IGKV2D-28P01615 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 176.9 ms