Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 MIR365B-201ENST00000362317 111 ntBASIC6.64□□□□□ -1.35
MBD4O95243 U3.10-201ENST00000364459 214 ntBASIC6.64□□□□□ -1.35
MBD4O95243 RN7SKP6-201ENST00000364795 319 ntBASIC6.64□□□□□ -1.35
MBD4O95243 AL353625.1-202ENST00000366273 571 ntBASIC6.64□□□□□ -1.35
MBD4O95243 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
MBD4O95243 SNORA16A-201ENST00000384342 137 ntBASIC6.64□□□□□ -1.35
MBD4O95243 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
MBD4O95243 NPM1P4-201ENST00000414095 812 ntBASIC6.64□□□□□ -1.35
MBD4O95243 RNF10P1-201ENST00000418589 369 ntBASIC6.64□□□□□ -1.35
MBD4O95243 CFL1P1-202ENST00000432948 411 ntBASIC6.64□□□□□ -1.35
MBD4O95243 AL138787.1-202ENST00000437804 898 ntBASIC6.64□□□□□ -1.35
MBD4O95243 AL133445.1-201ENST00000467051 452 ntBASIC6.64□□□□□ -1.35
MBD4O95243 RN7SL51P-201ENST00000468230 285 ntBASIC6.64□□□□□ -1.35
MBD4O95243 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC6.64□□□□□ -1.35
MBD4O95243 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC6.64□□□□□ -1.35
MBD4O95243 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.64□□□□□ -1.35
MBD4O95243 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC6.64□□□□□ -1.35
MBD4O95243 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.64□□□□□ -1.35
MBD4O95243 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.64□□□□□ -1.35
MBD4O95243 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
MBD4O95243 AC007225.2-201ENST00000562529 256 ntBASIC6.64□□□□□ -1.35
MBD4O95243 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.64□□□□□ -1.35
MBD4O95243 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.64□□□□□ -1.35
MBD4O95243 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC6.64□□□□□ -1.35
MBD4O95243 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.64□□□□□ -1.35
MBD4O95243 AL133406.3-201ENST00000606817 541 ntBASIC6.64□□□□□ -1.35
MBD4O95243 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.64□□□□□ -1.35
MBD4O95243 MIR6826-201ENST00000617808 98 ntBASIC6.64□□□□□ -1.35
MBD4O95243 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
MBD4O95243 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.64□□□□□ -1.35
MBD4O95243 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.64□□□□□ -1.35
MBD4O95243 OR10AB1P-202ENST00000641219 1686 ntBASIC6.64□□□□□ -1.35
MBD4O95243 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
MBD4O95243 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
MBD4O95243 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
MBD4O95243 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
MBD4O95243 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
MBD4O95243 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
MBD4O95243 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
MBD4O95243 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
MBD4O95243 RNU6-670P-201ENST00000364312 104 ntBASIC6.63□□□□□ -1.35
MBD4O95243 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.63□□□□□ -1.35
MBD4O95243 MIR551A-201ENST00000385042 96 ntBASIC6.63□□□□□ -1.35
MBD4O95243 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
MBD4O95243 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
MBD4O95243 AL592429.1-201ENST00000403909 1473 ntBASIC6.63□□□□□ -1.35
MBD4O95243 RNU6-564P-201ENST00000410983 104 ntBASIC6.63□□□□□ -1.35
MBD4O95243 SEPT7P8-201ENST00000413308 775 ntBASIC6.63□□□□□ -1.35
MBD4O95243 Z93019.1-201ENST00000416450 973 ntBASIC6.63□□□□□ -1.35
MBD4O95243 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
MBD4O95243 MTND5P23-201ENST00000430812 1655 ntBASIC6.63□□□□□ -1.35
MBD4O95243 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.63□□□□□ -1.35
MBD4O95243 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.63□□□□□ -1.35
MBD4O95243 SNRPFP2-201ENST00000440710 251 ntBASIC6.63□□□□□ -1.35
MBD4O95243 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.63□□□□□ -1.35
MBD4O95243 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
MBD4O95243 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.63□□□□□ -1.35
MBD4O95243 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.63□□□□□ -1.35
MBD4O95243 ATP5LP5-201ENST00000483050 299 ntBASIC6.63□□□□□ -1.35
MBD4O95243 RPS17P5-201ENST00000498293 408 ntBASIC6.63□□□□□ -1.35
MBD4O95243 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
MBD4O95243 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.63□□□□□ -1.35
MBD4O95243 GAPDHP62-201ENST00000515313 990 ntBASIC6.63□□□□□ -1.35
MBD4O95243 RN7SKP99-201ENST00000517028 307 ntBASIC6.63□□□□□ -1.35
MBD4O95243 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
MBD4O95243 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.63□□□□□ -1.35
MBD4O95243 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.63□□□□□ -1.35
MBD4O95243 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.63□□□□□ -1.35
MBD4O95243 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.63□□□□□ -1.35
MBD4O95243 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.63□□□□□ -1.35
MBD4O95243 HMGN2P47-201ENST00000559378 272 ntBASIC6.63□□□□□ -1.35
MBD4O95243 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC6.63□□□□□ -1.35
MBD4O95243 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC6.63□□□□□ -1.35
MBD4O95243 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC6.63□□□□□ -1.35
MBD4O95243 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
MBD4O95243 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.63□□□□□ -1.35
MBD4O95243 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.63□□□□□ -1.35
MBD4O95243 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.63□□□□□ -1.35
MBD4O95243 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
MBD4O95243 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
MBD4O95243 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
MBD4O95243 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
MBD4O95243 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
MBD4O95243 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
MBD4O95243 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
MBD4O95243 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
MBD4O95243 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
MBD4O95243 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
MBD4O95243 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
MBD4O95243 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
MBD4O95243 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
MBD4O95243 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
MBD4O95243 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
MBD4O95243 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.62□□□□□ -1.35
MBD4O95243 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.62□□□□□ -1.35
MBD4O95243 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
MBD4O95243 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
MBD4O95243 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
MBD4O95243 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.62□□□□□ -1.35
MBD4O95243 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms