Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.58□□□□□ -1.68
UPK1BO75841 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.58□□□□□ -1.68
UPK1BO75841 AC108751.5-201ENST00000492880 1336 ntBASIC4.58□□□□□ -1.68
UPK1BO75841 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
UPK1BO75841 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
UPK1BO75841 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
UPK1BO75841 RPS24P12-201ENST00000402084 394 ntBASIC4.58□□□□□ -1.68
UPK1BO75841 PRELID1P1-201ENST00000403549 660 ntBASIC4.58□□□□□ -1.68
UPK1BO75841 AL356968.2-201ENST00000412769 1257 ntBASIC4.58□□□□□ -1.68
UPK1BO75841 FABP7P1-201ENST00000424004 391 ntBASIC4.58□□□□□ -1.68
UPK1BO75841 NAP1L4P2-201ENST00000425958 899 ntBASIC4.58□□□□□ -1.68
UPK1BO75841 FTLP19-201ENST00000433300 394 ntBASIC4.58□□□□□ -1.68
UPK1BO75841 ATP5LP4-201ENST00000434169 307 ntBASIC4.58□□□□□ -1.68
UPK1BO75841 RPS21P1-201ENST00000434479 247 ntBASIC4.58□□□□□ -1.68
UPK1BO75841 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.58□□□□□ -1.68
UPK1BO75841 PCNPP2-201ENST00000441651 455 ntBASIC4.58□□□□□ -1.68
UPK1BO75841 USP12-AS2-201ENST00000452222 279 ntTSL 3 BASIC4.58□□□□□ -1.68
UPK1BO75841 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.58□□□□□ -1.68
UPK1BO75841 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.58□□□□□ -1.68
UPK1BO75841 RPS6P2-201ENST00000454208 705 ntBASIC4.58□□□□□ -1.68
UPK1BO75841 AC005008.1-201ENST00000456151 612 ntBASIC4.58□□□□□ -1.68
UPK1BO75841 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC4.58□□□□□ -1.68
UPK1BO75841 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC4.58□□□□□ -1.68
UPK1BO75841 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC4.58□□□□□ -1.68
UPK1BO75841 RPL23AP37-201ENST00000479658 549 ntBASIC4.58□□□□□ -1.68
UPK1BO75841 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.58□□□□□ -1.68
UPK1BO75841 AC114940.1-201ENST00000512162 1265 ntBASIC4.58□□□□□ -1.68
UPK1BO75841 AC096661.1-201ENST00000515870 822 ntBASIC4.58□□□□□ -1.68
UPK1BO75841 AC009879.1-201ENST00000520029 839 ntBASIC4.58□□□□□ -1.68
UPK1BO75841 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC4.58□□□□□ -1.68
UPK1BO75841 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC4.58□□□□□ -1.68
UPK1BO75841 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC4.58□□□□□ -1.68
UPK1BO75841 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
UPK1BO75841 AC103855.4-201ENST00000533158 265 ntBASIC4.58□□□□□ -1.68
UPK1BO75841 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC4.58□□□□□ -1.68
UPK1BO75841 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC4.58□□□□□ -1.68
UPK1BO75841 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.58□□□□□ -1.68
UPK1BO75841 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.58□□□□□ -1.68
UPK1BO75841 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC4.58□□□□□ -1.68
UPK1BO75841 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.58□□□□□ -1.68
UPK1BO75841 AC037479.1-201ENST00000558361 625 ntBASIC4.58□□□□□ -1.68
UPK1BO75841 AP005403.1-201ENST00000579720 229 ntBASIC4.58□□□□□ -1.68
UPK1BO75841 RN7SL356P-201ENST00000582228 248 ntBASIC4.58□□□□□ -1.68
UPK1BO75841 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC4.58□□□□□ -1.68
UPK1BO75841 AC005495.1-201ENST00000586611 1211 ntBASIC4.58□□□□□ -1.68
UPK1BO75841 RPSAP75-201ENST00000605848 301 ntBASIC4.58□□□□□ -1.68
UPK1BO75841 AL136131.3-201ENST00000607600 188 ntBASIC4.58□□□□□ -1.68
UPK1BO75841 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC4.58□□□□□ -1.68
UPK1BO75841 AC018558.4-201ENST00000622153 281 ntBASIC4.58□□□□□ -1.68
UPK1BO75841 AC133485.6-201ENST00000624045 688 ntBASIC4.58□□□□□ -1.68
UPK1BO75841 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
UPK1BO75841 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
UPK1BO75841 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
UPK1BO75841 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
UPK1BO75841 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
UPK1BO75841 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
UPK1BO75841 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.57□□□□□ -1.68
UPK1BO75841 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.57□□□□□ -1.68
UPK1BO75841 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
UPK1BO75841 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.57□□□□□ -1.68
UPK1BO75841 DDX18P6-201ENST00000450119 1997 ntBASIC4.57□□□□□ -1.68
UPK1BO75841 AC007382.1-201ENST00000624376 2618 ntBASIC4.57□□□□□ -1.68
UPK1BO75841 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
UPK1BO75841 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
UPK1BO75841 RNA5SP28-201ENST00000363841 119 ntBASIC4.57□□□□□ -1.68
UPK1BO75841 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
UPK1BO75841 YWHAZP4-201ENST00000392459 708 ntBASIC4.57□□□□□ -1.68
UPK1BO75841 AL035079.1-201ENST00000405210 287 ntBASIC4.57□□□□□ -1.68
UPK1BO75841 RN7SKP205-201ENST00000410999 307 ntBASIC4.57□□□□□ -1.68
UPK1BO75841 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.57□□□□□ -1.68
UPK1BO75841 RPL22P11-201ENST00000434894 385 ntBASIC4.57□□□□□ -1.68
UPK1BO75841 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.57□□□□□ -1.68
UPK1BO75841 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.57□□□□□ -1.68
UPK1BO75841 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC4.57□□□□□ -1.68
UPK1BO75841 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.57□□□□□ -1.68
UPK1BO75841 RN7SL372P-201ENST00000461982 298 ntBASIC4.57□□□□□ -1.68
UPK1BO75841 RPL12P30-201ENST00000488389 499 ntBASIC4.57□□□□□ -1.68
UPK1BO75841 AC009120.1-201ENST00000493458 473 ntBASIC4.57□□□□□ -1.68
UPK1BO75841 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.57□□□□□ -1.68
UPK1BO75841 MINOS1P4-201ENST00000515470 318 ntBASIC4.57□□□□□ -1.68
UPK1BO75841 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.57□□□□□ -1.68
UPK1BO75841 IGLV3-30-201ENST00000524362 298 ntBASIC4.57□□□□□ -1.68
UPK1BO75841 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC4.57□□□□□ -1.68
UPK1BO75841 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC4.57□□□□□ -1.68
UPK1BO75841 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.57□□□□□ -1.68
UPK1BO75841 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.57□□□□□ -1.68
UPK1BO75841 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC4.57□□□□□ -1.68
UPK1BO75841 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC4.57□□□□□ -1.68
UPK1BO75841 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC4.57□□□□□ -1.68
UPK1BO75841 CYCSP40-201ENST00000575927 294 ntBASIC4.57□□□□□ -1.68
UPK1BO75841 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC4.57□□□□□ -1.68
UPK1BO75841 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.57□□□□□ -1.68
UPK1BO75841 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
UPK1BO75841 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.57□□□□□ -1.68
UPK1BO75841 AL080312.2-201ENST00000613001 630 ntBASIC4.57□□□□□ -1.68
UPK1BO75841 AC009283.1-201ENST00000615852 645 ntBASIC4.57□□□□□ -1.68
UPK1BO75841 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.57□□□□□ -1.68
UPK1BO75841 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
UPK1BO75841 AP003072.5-201ENST00000623872 773 ntBASIC4.57□□□□□ -1.68
UPK1BO75841 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms