Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.43□□□□□ -1.54
SHOX2O60902 RN7SKP46-201ENST00000515942 234 ntBASIC5.43□□□□□ -1.54
SHOX2O60902 AC022360.1-201ENST00000521058 340 ntBASIC5.43□□□□□ -1.54
SHOX2O60902 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.43□□□□□ -1.54
SHOX2O60902 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.43□□□□□ -1.54
SHOX2O60902 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SHOX2O60902 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.43□□□□□ -1.54
SHOX2O60902 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.43□□□□□ -1.54
SHOX2O60902 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.43□□□□□ -1.54
SHOX2O60902 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.43□□□□□ -1.54
SHOX2O60902 AC007342.5-201ENST00000571340 2142 ntBASIC5.43□□□□□ -1.54
SHOX2O60902 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.43□□□□□ -1.54
SHOX2O60902 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.43□□□□□ -1.54
SHOX2O60902 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.43□□□□□ -1.54
SHOX2O60902 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.43□□□□□ -1.54
SHOX2O60902 AC129915.3-201ENST00000634128 948 ntBASIC5.43□□□□□ -1.54
SHOX2O60902 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.43□□□□□ -1.54
SHOX2O60902 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
SHOX2O60902 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SHOX2O60902 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
SHOX2O60902 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHOX2O60902 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
SHOX2O60902 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHOX2O60902 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.42□□□□□ -1.54
SHOX2O60902 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
SHOX2O60902 MT-RNR2-201ENST00000387347 1559 ntBASIC5.42□□□□□ -1.54
SHOX2O60902 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.42□□□□□ -1.54
SHOX2O60902 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SHOX2O60902 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SHOX2O60902 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHOX2O60902 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHOX2O60902 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHOX2O60902 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SHOX2O60902 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SHOX2O60902 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.42□□□□□ -1.54
SHOX2O60902 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SHOX2O60902 DBIP1-201ENST00000401435 260 ntBASIC5.42□□□□□ -1.54
SHOX2O60902 AL096711.1-201ENST00000404780 554 ntBASIC5.42□□□□□ -1.54
SHOX2O60902 AL133260.1-201ENST00000405720 405 ntBASIC5.42□□□□□ -1.54
SHOX2O60902 RN7SKP125-201ENST00000410481 302 ntBASIC5.42□□□□□ -1.54
SHOX2O60902 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.42□□□□□ -1.54
SHOX2O60902 RPS6P23-201ENST00000413224 722 ntBASIC5.42□□□□□ -1.54
SHOX2O60902 EIF4A1P1-201ENST00000420241 934 ntBASIC5.42□□□□□ -1.54
SHOX2O60902 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.42□□□□□ -1.54
SHOX2O60902 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.42□□□□□ -1.54
SHOX2O60902 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
SHOX2O60902 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.42□□□□□ -1.54
SHOX2O60902 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.42□□□□□ -1.54
SHOX2O60902 PPIAP20-201ENST00000449839 135 ntBASIC5.42□□□□□ -1.54
SHOX2O60902 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.42□□□□□ -1.54
SHOX2O60902 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.42□□□□□ -1.54
SHOX2O60902 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SHOX2O60902 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHOX2O60902 GUSBP9-201ENST00000510138 584 ntBASIC5.42□□□□□ -1.54
SHOX2O60902 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.42□□□□□ -1.54
SHOX2O60902 RNA5SP441-201ENST00000516809 88 ntBASIC5.42□□□□□ -1.54
SHOX2O60902 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.42□□□□□ -1.54
SHOX2O60902 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.42□□□□□ -1.54
SHOX2O60902 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.42□□□□□ -1.54
SHOX2O60902 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.42□□□□□ -1.54
SHOX2O60902 AC007346.1-201ENST00000569208 867 ntBASIC5.42□□□□□ -1.54
SHOX2O60902 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.42□□□□□ -1.54
SHOX2O60902 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.42□□□□□ -1.54
SHOX2O60902 AC092681.3-201ENST00000609463 678 ntBASIC5.42□□□□□ -1.54
SHOX2O60902 AL135999.3-201ENST00000610501 812 ntBASIC5.42□□□□□ -1.54
SHOX2O60902 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.42□□□□□ -1.54
SHOX2O60902 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.42□□□□□ -1.54
SHOX2O60902 AC010325.3-201ENST00000641084 394 ntBASIC5.42□□□□□ -1.54
SHOX2O60902 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHOX2O60902 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHOX2O60902 AL513548.1-201ENST00000562904 1724 ntBASIC5.42□□□□□ -1.54
SHOX2O60902 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
SHOX2O60902 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SHOX2O60902 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
SHOX2O60902 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.42□□□□□ -1.54
SHOX2O60902 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHOX2O60902 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHOX2O60902 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHOX2O60902 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.41□□□□□ -1.54
SHOX2O60902 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHOX2O60902 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.41□□□□□ -1.54
SHOX2O60902 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHOX2O60902 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHOX2O60902 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHOX2O60902 AL159987.1-201ENST00000347911 293 ntBASIC5.41□□□□□ -1.54
SHOX2O60902 RN7SKP199-201ENST00000410325 305 ntBASIC5.41□□□□□ -1.54
SHOX2O60902 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.41□□□□□ -1.54
SHOX2O60902 Z68694.1-201ENST00000413929 841 ntBASIC5.41□□□□□ -1.54
SHOX2O60902 AL035422.1-201ENST00000414193 397 ntBASIC5.41□□□□□ -1.54
SHOX2O60902 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.41□□□□□ -1.54
SHOX2O60902 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.41□□□□□ -1.54
SHOX2O60902 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.41□□□□□ -1.54
SHOX2O60902 RPS26P4-201ENST00000431743 355 ntBASIC5.41□□□□□ -1.54
SHOX2O60902 RPL7AP61-201ENST00000443410 636 ntBASIC5.41□□□□□ -1.54
SHOX2O60902 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHOX2O60902 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.41□□□□□ -1.54
SHOX2O60902 MRPL35P2-201ENST00000448009 511 ntBASIC5.41□□□□□ -1.54
SHOX2O60902 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.41□□□□□ -1.54
SHOX2O60902 AC005017.1-201ENST00000482002 490 ntBASIC5.41□□□□□ -1.54
SHOX2O60902 AP002453.1-201ENST00000492327 668 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms