Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AC007068.1-201ENST00000396690 844 ntBASIC5.24□□□□□ -1.57
HCN1O60741 GPS2P1-201ENST00000411761 986 ntBASIC5.24□□□□□ -1.57
HCN1O60741 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.24□□□□□ -1.57
HCN1O60741 AC013268.2-201ENST00000420753 337 ntBASIC5.24□□□□□ -1.57
HCN1O60741 AC079355.1-201ENST00000421770 223 ntBASIC5.24□□□□□ -1.57
HCN1O60741 OR10T1P-201ENST00000424327 947 ntBASIC5.24□□□□□ -1.57
HCN1O60741 HMGB3P24-201ENST00000433260 622 ntBASIC5.24□□□□□ -1.57
HCN1O60741 RPL12P18-201ENST00000437175 325 ntBASIC5.24□□□□□ -1.57
HCN1O60741 OR7E116P-201ENST00000448529 957 ntBASIC5.24□□□□□ -1.57
HCN1O60741 RPS23P9-201ENST00000448848 438 ntBASIC5.24□□□□□ -1.57
HCN1O60741 NPM1P19-201ENST00000450070 712 ntBASIC5.24□□□□□ -1.57
HCN1O60741 GAPDHP14-201ENST00000450472 937 ntBASIC5.24□□□□□ -1.57
HCN1O60741 AL157777.1-201ENST00000468100 304 ntBASIC5.24□□□□□ -1.57
HCN1O60741 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.24□□□□□ -1.57
HCN1O60741 AC074255.1-201ENST00000511259 501 ntBASIC5.24□□□□□ -1.57
HCN1O60741 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.24□□□□□ -1.57
HCN1O60741 AC021146.10-201ENST00000515628 706 ntBASIC5.24□□□□□ -1.57
HCN1O60741 SCARNA6.1-201ENST00000516989 238 ntBASIC5.24□□□□□ -1.57
HCN1O60741 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.24□□□□□ -1.57
HCN1O60741 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.24□□□□□ -1.57
HCN1O60741 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.24□□□□□ -1.57
HCN1O60741 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.24□□□□□ -1.57
HCN1O60741 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.24□□□□□ -1.57
HCN1O60741 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.24□□□□□ -1.57
HCN1O60741 SNORD95-201ENST00000579879 68 ntBASIC5.24□□□□□ -1.57
HCN1O60741 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.24□□□□□ -1.57
HCN1O60741 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.24□□□□□ -1.57
HCN1O60741 FO393422.1-201ENST00000603908 708 ntBASIC5.24□□□□□ -1.57
HCN1O60741 MIR6886-201ENST00000619864 61 ntBASIC5.24□□□□□ -1.57
HCN1O60741 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.24□□□□□ -1.57
HCN1O60741 AC007683.2-201ENST00000624681 714 ntBASIC5.24□□□□□ -1.57
HCN1O60741 AC022919.1-201ENST00000624979 626 ntBASIC5.24□□□□□ -1.57
HCN1O60741 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
HCN1O60741 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.24□□□□□ -1.57
HCN1O60741 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HCN1O60741 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.24□□□□□ -1.57
HCN1O60741 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.24□□□□□ -1.57
HCN1O60741 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HCN1O60741 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HCN1O60741 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
HCN1O60741 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.24□□□□□ -1.57
HCN1O60741 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HCN1O60741 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HCN1O60741 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HCN1O60741 MFSD8-219ENST00000641228 2559 ntBASIC5.23□□□□□ -1.57
HCN1O60741 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
HCN1O60741 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
HCN1O60741 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
HCN1O60741 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HCN1O60741 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HCN1O60741 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.23□□□□□ -1.57
HCN1O60741 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
HCN1O60741 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
HCN1O60741 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.23□□□□□ -1.57
HCN1O60741 RNU6-249P-201ENST00000363016 102 ntBASIC5.23□□□□□ -1.57
HCN1O60741 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HCN1O60741 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HCN1O60741 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HCN1O60741 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.23□□□□□ -1.57
HCN1O60741 RN7SKP229-201ENST00000410465 302 ntBASIC5.23□□□□□ -1.57
HCN1O60741 AL513325.1-201ENST00000417716 1034 ntBASIC5.23□□□□□ -1.57
HCN1O60741 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.23□□□□□ -1.57
HCN1O60741 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.23□□□□□ -1.57
HCN1O60741 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.23□□□□□ -1.57
HCN1O60741 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.23□□□□□ -1.57
HCN1O60741 RPS23P6-201ENST00000466136 431 ntBASIC5.23□□□□□ -1.57
HCN1O60741 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HCN1O60741 RN7SL570P-201ENST00000484405 292 ntBASIC5.23□□□□□ -1.57
HCN1O60741 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.23□□□□□ -1.57
HCN1O60741 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HCN1O60741 AC138866.2-201ENST00000508650 584 ntBASIC5.23□□□□□ -1.57
HCN1O60741 AC074087.1-201ENST00000512059 724 ntBASIC5.23□□□□□ -1.57
HCN1O60741 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.23□□□□□ -1.57
HCN1O60741 RPL7L1P4-201ENST00000513004 707 ntBASIC5.23□□□□□ -1.57
HCN1O60741 SCARNA21.2-201ENST00000516600 166 ntBASIC5.23□□□□□ -1.57
HCN1O60741 SNORA43.3-201ENST00000517240 103 ntBASIC5.23□□□□□ -1.57
HCN1O60741 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.23□□□□□ -1.57
HCN1O60741 AC020937.1-201ENST00000519677 1013 ntBASIC5.23□□□□□ -1.57
HCN1O60741 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.23□□□□□ -1.57
HCN1O60741 AC125612.1-201ENST00000547580 377 ntBASIC5.23□□□□□ -1.57
HCN1O60741 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.23□□□□□ -1.57
HCN1O60741 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.23□□□□□ -1.57
HCN1O60741 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.23□□□□□ -1.57
HCN1O60741 AC007225.2-201ENST00000562529 256 ntBASIC5.23□□□□□ -1.57
HCN1O60741 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HCN1O60741 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.23□□□□□ -1.57
HCN1O60741 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.23□□□□□ -1.57
HCN1O60741 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.23□□□□□ -1.57
HCN1O60741 AL589674.2-201ENST00000604304 337 ntBASIC5.23□□□□□ -1.57
HCN1O60741 AL035661.1-201ENST00000620459 1144 ntBASIC5.23□□□□□ -1.57
HCN1O60741 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HCN1O60741 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
HCN1O60741 AC003985.2-201ENST00000562268 1669 ntBASIC5.23□□□□□ -1.57
HCN1O60741 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HCN1O60741 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.23□□□□□ -1.57
HCN1O60741 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HCN1O60741 AL360270.2-201ENST00000562952 5985 ntBASIC5.23□□□□□ -1.57
HCN1O60741 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.23□□□□□ -1.57
HCN1O60741 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.23□□□□□ -1.57
HCN1O60741 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms