Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS29Q9UBQ0 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS29Q9UBQ0 IPPKP1-201ENST00000422501 768 ntBASIC5.17□□□□□ -1.58
VPS29Q9UBQ0 HSPD1P12-201ENST00000429127 1069 ntBASIC5.17□□□□□ -1.58
VPS29Q9UBQ0 RPL23AP19-201ENST00000436229 369 ntBASIC5.17□□□□□ -1.58
VPS29Q9UBQ0 AC064862.4-201ENST00000442180 334 ntBASIC5.17□□□□□ -1.58
VPS29Q9UBQ0 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS29Q9UBQ0 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS29Q9UBQ0 RPS12P31-201ENST00000491419 398 ntBASIC5.17□□□□□ -1.58
VPS29Q9UBQ0 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS29Q9UBQ0 AC022826.1-201ENST00000519383 805 ntBASIC5.17□□□□□ -1.58
VPS29Q9UBQ0 AC022360.1-201ENST00000521058 340 ntBASIC5.17□□□□□ -1.58
VPS29Q9UBQ0 AC092709.1-201ENST00000521355 1045 ntBASIC5.17□□□□□ -1.58
VPS29Q9UBQ0 AP004609.2-201ENST00000532177 190 ntBASIC5.17□□□□□ -1.58
VPS29Q9UBQ0 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS29Q9UBQ0 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS29Q9UBQ0 NMNAT1P5-201ENST00000559657 841 ntBASIC5.17□□□□□ -1.58
VPS29Q9UBQ0 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS29Q9UBQ0 AC009027.1-201ENST00000604510 479 ntBASIC5.17□□□□□ -1.58
VPS29Q9UBQ0 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS29Q9UBQ0 MIR1910-201ENST00000636955 80 ntBASIC5.17□□□□□ -1.58
VPS29Q9UBQ0 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
VPS29Q9UBQ0 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VPS29Q9UBQ0 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS29Q9UBQ0 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS29Q9UBQ0 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VPS29Q9UBQ0 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS29Q9UBQ0 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS29Q9UBQ0 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS29Q9UBQ0 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VPS29Q9UBQ0 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
VPS29Q9UBQ0 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS29Q9UBQ0 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
VPS29Q9UBQ0 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 AL353796.1-201ENST00000561542 3241 ntBASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 MTND5P12-201ENST00000502851 1449 ntBASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 SNORA16A-201ENST00000384342 137 ntBASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 MIR621-201ENST00000384919 96 ntBASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 NACAP7-201ENST00000407371 609 ntBASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 SRSF1P1-201ENST00000424058 520 ntBASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 RPL36AP39-201ENST00000445859 318 ntBASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 AC105399.1-202ENST00000447303 205 ntBASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 AC022133.1-201ENST00000490961 571 ntBASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 AC074087.1-201ENST00000512059 724 ntBASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 AC130364.2-201ENST00000528639 604 ntBASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 AC015720.2-201ENST00000567709 334 ntBASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 NDUFA5P11-201ENST00000567995 343 ntBASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 AC005341.1-201ENST00000571086 708 ntBASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 AC060766.1-201ENST00000590824 627 ntBASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 AC026367.3-201ENST00000619032 590 ntBASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 AC005261.6-201ENST00000623072 1387 ntBASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.16□□□□□ -1.58
VPS29Q9UBQ0 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.58
VPS29Q9UBQ0 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.15□□□□□ -1.58
VPS29Q9UBQ0 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.15□□□□□ -1.58
VPS29Q9UBQ0 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
VPS29Q9UBQ0 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.15□□□□□ -1.58
VPS29Q9UBQ0 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
VPS29Q9UBQ0 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
VPS29Q9UBQ0 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.15□□□□□ -1.58
VPS29Q9UBQ0 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.15□□□□□ -1.59
VPS29Q9UBQ0 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.15□□□□□ -1.59
VPS29Q9UBQ0 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
VPS29Q9UBQ0 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.15□□□□□ -1.59
VPS29Q9UBQ0 HYALP1-201ENST00000417674 1279 ntBASIC5.15□□□□□ -1.59
VPS29Q9UBQ0 MTND6P12-201ENST00000428247 522 ntBASIC5.15□□□□□ -1.59
VPS29Q9UBQ0 AC124944.2-201ENST00000429866 1242 ntBASIC5.15□□□□□ -1.59
VPS29Q9UBQ0 HSPE1P27-201ENST00000430808 296 ntBASIC5.15□□□□□ -1.59
VPS29Q9UBQ0 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.15□□□□□ -1.59
VPS29Q9UBQ0 AC090018.1-201ENST00000434369 367 ntBASIC5.15□□□□□ -1.59
VPS29Q9UBQ0 GSTM5P1-201ENST00000434751 660 ntBASIC5.15□□□□□ -1.59
VPS29Q9UBQ0 CYCSP51-201ENST00000443545 318 ntBASIC5.15□□□□□ -1.59
VPS29Q9UBQ0 AC073109.1-201ENST00000445066 978 ntBASIC5.15□□□□□ -1.59
VPS29Q9UBQ0 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms