Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CCDC88CQ9P219 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC88CQ9P219 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC88CQ9P219 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC88CQ9P219 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.21□□□□□ -1.58
CCDC88CQ9P219 SPRYD7P1-201ENST00000443861 570 ntBASIC5.21□□□□□ -1.58
CCDC88CQ9P219 NDUFA5P12-201ENST00000503796 343 ntBASIC5.21□□□□□ -1.58
CCDC88CQ9P219 ATP5LP3-201ENST00000514223 304 ntBASIC5.21□□□□□ -1.58
CCDC88CQ9P219 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC88CQ9P219 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC88CQ9P219 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.21□□□□□ -1.58
CCDC88CQ9P219 OR11J2P-201ENST00000555298 907 ntBASIC5.21□□□□□ -1.58
CCDC88CQ9P219 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC88CQ9P219 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC88CQ9P219 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC88CQ9P219 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC88CQ9P219 AC018445.2-201ENST00000622987 260 ntBASIC5.21□□□□□ -1.58
CCDC88CQ9P219 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC88CQ9P219 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC88CQ9P219 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CCDC88CQ9P219 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC88CQ9P219 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
CCDC88CQ9P219 MT-RNR2-201ENST00000387347 1559 ntBASIC5.2□□□□□ -1.58
CCDC88CQ9P219 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC88CQ9P219 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC88CQ9P219 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC88CQ9P219 AC009962.1-201ENST00000567327 3813 ntBASIC5.2□□□□□ -1.58
CCDC88CQ9P219 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC88CQ9P219 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
CCDC88CQ9P219 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC88CQ9P219 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC88CQ9P219 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC88CQ9P219 RMRPP5-201ENST00000411156 267 ntBASIC5.2□□□□□ -1.58
CCDC88CQ9P219 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC88CQ9P219 OR52B5P-201ENST00000435337 951 ntBASIC5.2□□□□□ -1.58
CCDC88CQ9P219 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC88CQ9P219 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC88CQ9P219 RN7SL188P-201ENST00000469842 285 ntBASIC5.2□□□□□ -1.58
CCDC88CQ9P219 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CCDC88CQ9P219 RPSAP51-201ENST00000497462 645 ntBASIC5.2□□□□□ -1.58
CCDC88CQ9P219 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.2□□□□□ -1.58
CCDC88CQ9P219 IMMP1LP3-201ENST00000604197 224 ntBASIC5.2□□□□□ -1.58
CCDC88CQ9P219 OR52B5P-202ENST00000641118 1110 ntBASIC5.2□□□□□ -1.58
CCDC88CQ9P219 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC88CQ9P219 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC88CQ9P219 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC88CQ9P219 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC88CQ9P219 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC88CQ9P219 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC88CQ9P219 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC88CQ9P219 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC88CQ9P219 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CCDC88CQ9P219 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC88CQ9P219 SNORA5.1-201ENST00000384275 131 ntBASIC5.19□□□□□ -1.58
CCDC88CQ9P219 AL589647.1-201ENST00000402485 466 ntBASIC5.19□□□□□ -1.58
CCDC88CQ9P219 AC096921.1-201ENST00000411661 375 ntBASIC5.19□□□□□ -1.58
CCDC88CQ9P219 AC108075.1-201ENST00000424692 529 ntBASIC5.19□□□□□ -1.58
CCDC88CQ9P219 BRWD1P3-201ENST00000428816 390 ntBASIC5.19□□□□□ -1.58
CCDC88CQ9P219 FABP7P2-201ENST00000429946 379 ntBASIC5.19□□□□□ -1.58
CCDC88CQ9P219 TMEM183AP1-205ENST00000432739 290 ntBASIC5.19□□□□□ -1.58
CCDC88CQ9P219 AC126177.5-201ENST00000549599 178 ntBASIC5.19□□□□□ -1.58
CCDC88CQ9P219 MRPS21P7-201ENST00000566937 238 ntBASIC5.19□□□□□ -1.58
CCDC88CQ9P219 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.19□□□□□ -1.58
CCDC88CQ9P219 AC007786.3-201ENST00000615154 596 ntBASIC5.19□□□□□ -1.58
CCDC88CQ9P219 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC88CQ9P219 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC88CQ9P219 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CCDC88CQ9P219 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CCDC88CQ9P219 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC88CQ9P219 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC88CQ9P219 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CCDC88CQ9P219 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC88CQ9P219 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.19□□□□□ -1.58
CCDC88CQ9P219 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC88CQ9P219 PWAR1-201ENST00000624188 2414 ntBASIC5.19□□□□□ -1.58
CCDC88CQ9P219 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC88CQ9P219 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC88CQ9P219 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.19□□□□□ -1.58
CCDC88CQ9P219 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
CCDC88CQ9P219 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC88CQ9P219 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC88CQ9P219 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
CCDC88CQ9P219 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC88CQ9P219 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC88CQ9P219 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CCDC88CQ9P219 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC88CQ9P219 GPS2P1-201ENST00000411761 986 ntBASIC5.19□□□□□ -1.58
CCDC88CQ9P219 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC88CQ9P219 RPL32P9-201ENST00000487963 407 ntBASIC5.19□□□□□ -1.58
CCDC88CQ9P219 OR5M14P-201ENST00000506803 618 ntBASIC5.19□□□□□ -1.58
CCDC88CQ9P219 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.19□□□□□ -1.58
CCDC88CQ9P219 AC111000.6-201ENST00000514471 709 ntBASIC5.19□□□□□ -1.58
CCDC88CQ9P219 NRBF2P4-201ENST00000520874 850 ntBASIC5.19□□□□□ -1.58
CCDC88CQ9P219 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.19□□□□□ -1.58
CCDC88CQ9P219 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.19□□□□□ -1.58
CCDC88CQ9P219 RPL10P14-201ENST00000565265 298 ntBASIC5.19□□□□□ -1.58
CCDC88CQ9P219 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CCDC88CQ9P219 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.19□□□□□ -1.58
CCDC88CQ9P219 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC88CQ9P219 SUGT1P3-202ENST00000604259 383 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms