Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 FTH1P20-201ENST00000434913 548 ntBASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 AC092170.1-201ENST00000440211 356 ntBASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 AC002542.1-201ENST00000440683 193 ntBASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 HMGN1P32-201ENST00000441744 256 ntBASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 HSPE1P22-201ENST00000456856 327 ntBASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 AC026427.2-201ENST00000506228 536 ntBASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 RN7SKP98-201ENST00000517070 156 ntBASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 MTCO2P4-201ENST00000517968 247 ntBASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 MIR3137-201ENST00000577367 75 ntBASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 AL137190.1-201ENST00000603288 282 ntBASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 MIR6883-201ENST00000614952 78 ntBASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 AL031658.2-201ENST00000616850 651 ntBASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 AC136475.10-201ENST00000620253 385 ntBASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 AC006065.6-201ENST00000625201 545 ntBASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 MIR3662-201ENST00000637030 95 ntBASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 MTND4P14-201ENST00000435799 1354 ntBASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 AC126773.4-201ENST00000612545 3043 ntBASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 AC138393.1-206ENST00000540997 1886 ntBASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 Y_RNA.72-201ENST00000362894 103 ntBASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 Y_RNA.138-201ENST00000363462 102 ntBASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 CYCSP45-201ENST00000402289 315 ntBASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 AL353151.1-201ENST00000402406 604 ntBASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 KRT18P52-201ENST00000404956 846 ntBASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 FCF1P2-201ENST00000415284 583 ntBASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 NANOGP4-201ENST00000427230 913 ntBASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 SNX18P9-201ENST00000440580 835 ntBASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 CALM1P1-201ENST00000442082 433 ntBASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 AC097499.1-201ENST00000444277 208 ntBASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 CEACAMP5-201ENST00000448037 961 ntBASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 AL033528.1-201ENST00000453780 140 ntBASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 RPL36AP55-201ENST00000454114 305 ntBASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 AC073610.1-201ENST00000489971 396 ntBASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 AC112219.1-201ENST00000491567 947 ntTSL 3 BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 KCTD9P4-201ENST00000526766 1166 ntBASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 AC093027.1-201ENST00000546698 429 ntBASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 COX4I1P1-201ENST00000554239 509 ntBASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 AL132640.2-202ENST00000559732 614 ntBASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms