Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 MTND2P40-201ENST00000436718 841 ntBASIC6.52□□□□□ -1.37
SALL1Q9NSC2 RPS11P7-201ENST00000442125 465 ntBASIC6.52□□□□□ -1.37
SALL1Q9NSC2 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.52□□□□□ -1.37
SALL1Q9NSC2 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.52□□□□□ -1.37
SALL1Q9NSC2 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
SALL1Q9NSC2 AC109464.1-201ENST00000511091 819 ntBASIC6.52□□□□□ -1.37
SALL1Q9NSC2 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC6.52□□□□□ -1.37
SALL1Q9NSC2 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.52□□□□□ -1.37
SALL1Q9NSC2 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.52□□□□□ -1.37
SALL1Q9NSC2 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.52□□□□□ -1.37
SALL1Q9NSC2 AP004607.2-201ENST00000533949 322 ntBASIC6.52□□□□□ -1.37
SALL1Q9NSC2 OR11J2P-201ENST00000555298 907 ntBASIC6.52□□□□□ -1.37
SALL1Q9NSC2 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.52□□□□□ -1.37
SALL1Q9NSC2 MIR4700-201ENST00000578311 74 ntBASIC6.52□□□□□ -1.37
SALL1Q9NSC2 RN7SL356P-201ENST00000582228 248 ntBASIC6.52□□□□□ -1.37
SALL1Q9NSC2 AC095055.1-201ENST00000603472 1113 ntBASIC6.52□□□□□ -1.37
SALL1Q9NSC2 AL445222.1-201ENST00000607259 628 ntBASIC6.52□□□□□ -1.37
SALL1Q9NSC2 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.52□□□□□ -1.37
SALL1Q9NSC2 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.52□□□□□ -1.37
SALL1Q9NSC2 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.52□□□□□ -1.37
SALL1Q9NSC2 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.52□□□□□ -1.37
SALL1Q9NSC2 CYP4F35P-202ENST00000636121 390 ntBASIC6.52□□□□□ -1.37
SALL1Q9NSC2 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
SALL1Q9NSC2 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SALL1Q9NSC2 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
SALL1Q9NSC2 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SALL1Q9NSC2 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SALL1Q9NSC2 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.52□□□□□ -1.37
SALL1Q9NSC2 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.52□□□□□ -1.37
SALL1Q9NSC2 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SALL1Q9NSC2 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.52□□□□□ -1.37
SALL1Q9NSC2 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.52□□□□□ -1.37
SALL1Q9NSC2 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.52□□□□□ -1.37
SALL1Q9NSC2 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SALL1Q9NSC2 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SALL1Q9NSC2 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
SALL1Q9NSC2 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SALL1Q9NSC2 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SALL1Q9NSC2 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SALL1Q9NSC2 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.52□□□□□ -1.37
SALL1Q9NSC2 RPL23P2-201ENST00000320371 421 ntBASIC6.51□□□□□ -1.37
SALL1Q9NSC2 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
SALL1Q9NSC2 RN7SKP213-201ENST00000410746 298 ntBASIC6.51□□□□□ -1.37
SALL1Q9NSC2 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.51□□□□□ -1.37
SALL1Q9NSC2 NPM1P18-201ENST00000434232 732 ntBASIC6.51□□□□□ -1.37
SALL1Q9NSC2 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.51□□□□□ -1.37
SALL1Q9NSC2 AC023271.1-201ENST00000445936 1090 ntBASIC6.51□□□□□ -1.37
SALL1Q9NSC2 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.51□□□□□ -1.37
SALL1Q9NSC2 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.51□□□□□ -1.37
SALL1Q9NSC2 RN7SL610P-201ENST00000463845 291 ntBASIC6.51□□□□□ -1.37
SALL1Q9NSC2 RPSAP50-201ENST00000481955 852 ntBASIC6.51□□□□□ -1.37
SALL1Q9NSC2 AC004453.1-201ENST00000487895 408 ntBASIC6.51□□□□□ -1.37
SALL1Q9NSC2 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SALL1Q9NSC2 YWHABP2-201ENST00000540201 713 ntBASIC6.51□□□□□ -1.37
SALL1Q9NSC2 OR11H3P-201ENST00000554547 982 ntBASIC6.51□□□□□ -1.37
SALL1Q9NSC2 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
SALL1Q9NSC2 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.51□□□□□ -1.37
SALL1Q9NSC2 AC127381.1-201ENST00000555979 939 ntBASIC6.51□□□□□ -1.37
SALL1Q9NSC2 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.51□□□□□ -1.37
SALL1Q9NSC2 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.51□□□□□ -1.37
SALL1Q9NSC2 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.51□□□□□ -1.37
SALL1Q9NSC2 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.51□□□□□ -1.37
SALL1Q9NSC2 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC6.51□□□□□ -1.37
SALL1Q9NSC2 AC135068.5-201ENST00000624197 983 ntBASIC6.51□□□□□ -1.37
SALL1Q9NSC2 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SALL1Q9NSC2 OFD1P17-201ENST00000437639 3018 ntBASIC6.51□□□□□ -1.37
SALL1Q9NSC2 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SALL1Q9NSC2 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
SALL1Q9NSC2 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SALL1Q9NSC2 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
SALL1Q9NSC2 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SALL1Q9NSC2 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
SALL1Q9NSC2 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SALL1Q9NSC2 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SALL1Q9NSC2 SNORA17.1-201ENST00000362945 126 ntBASIC6.5□□□□□ -1.37
SALL1Q9NSC2 RNU1-43P-201ENST00000365052 165 ntBASIC6.5□□□□□ -1.37
SALL1Q9NSC2 U3.36-201ENST00000408418 213 ntBASIC6.5□□□□□ -1.37
SALL1Q9NSC2 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.5□□□□□ -1.37
SALL1Q9NSC2 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.5□□□□□ -1.37
SALL1Q9NSC2 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.5□□□□□ -1.37
SALL1Q9NSC2 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.5□□□□□ -1.37
SALL1Q9NSC2 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.5□□□□□ -1.37
SALL1Q9NSC2 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.5□□□□□ -1.37
SALL1Q9NSC2 RN7SL197P-201ENST00000466981 299 ntBASIC6.5□□□□□ -1.37
SALL1Q9NSC2 RN7SL826P-201ENST00000479724 288 ntBASIC6.5□□□□□ -1.37
SALL1Q9NSC2 NDUFA5P12-201ENST00000503796 343 ntBASIC6.5□□□□□ -1.37
SALL1Q9NSC2 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.5□□□□□ -1.37
SALL1Q9NSC2 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.5□□□□□ -1.37
SALL1Q9NSC2 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
SALL1Q9NSC2 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.5□□□□□ -1.37
SALL1Q9NSC2 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.5□□□□□ -1.37
SALL1Q9NSC2 AP000769.2-201ENST00000602344 396 ntBASIC6.5□□□□□ -1.37
SALL1Q9NSC2 AC007786.3-201ENST00000615154 596 ntBASIC6.5□□□□□ -1.37
SALL1Q9NSC2 AF117829.2-201ENST00000619538 361 ntBASIC6.5□□□□□ -1.37
SALL1Q9NSC2 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.5□□□□□ -1.37
SALL1Q9NSC2 AC099654.11-201ENST00000638857 294 ntBASIC6.5□□□□□ -1.37
SALL1Q9NSC2 LINC01739-205ENST00000641890 573 ntBASIC6.5□□□□□ -1.37
SALL1Q9NSC2 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SALL1Q9NSC2 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.5□□□□□ -1.37
SALL1Q9NSC2 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms