Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 AC053481.2-202ENST00000582394 1500 ntBASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 MIR937-201ENST00000401271 86 ntBASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 AL133173.1-201ENST00000423458 397 ntBASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 BX119904.3-201ENST00000428194 957 ntBASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 RANP1-206ENST00000455094 651 ntBASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 TRBV8-1-201ENST00000481590 279 ntBASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 RN7SL570P-201ENST00000484405 292 ntBASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 RN7SKP288-201ENST00000516227 268 ntBASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 MIR2117-201ENST00000516780 80 ntBASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 AC010245.2-201ENST00000606908 1167 ntBASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 MIR8080-201ENST00000622224 89 ntBASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 CASC19-264ENST00000641912 1184 ntBASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 AC016745.2-201ENST00000608834 3443 ntBASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 AC117409.1-201ENST00000470499 1310 ntBASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 CR383656.5-201ENST00000547616 1340 ntBASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.69□□□□□ -1.5
TM9SF3Q9HD45 AC006484.1-201ENST00000435086 1884 ntBASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 AC109446.4-201ENST00000623235 2755 ntBASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 AC005224.3-201ENST00000584683 2140 ntBASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 GAPDHP15-201ENST00000398586 975 ntBASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 AC009804.1-201ENST00000400949 179 ntBASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 AC244033.1-201ENST00000426826 870 ntBASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 EIF1P7-201ENST00000487533 337 ntBASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 RN7SL30P-201ENST00000488416 306 ntBASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 AC006499.3-201ENST00000506077 748 ntBASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 AC002456.2-201ENST00000509356 380 ntBASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 RNA5SP92-201ENST00000516437 110 ntBASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 AC096996.1-201ENST00000563813 325 ntBASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 AC002069.2-201ENST00000603580 883 ntBASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 SUGT1P3-202ENST00000604259 383 ntBASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 AC087468.1-201ENST00000604365 630 ntBASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 AC008115.4-201ENST00000619780 775 ntBASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 MIR6837-201ENST00000620884 64 ntBASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 AC006840.1-201ENST00000623069 542 ntBASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 SAMMSON-227ENST00000642114 1199 ntBASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 PABPC1P6-201ENST00000445594 1829 ntBASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.68□□□□□ -1.5
TM9SF3Q9HD45 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms