Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AC022400.9-201ENST00000623633 273 ntBASIC6.55□□□□□ -1.36
CD248Q9HCU0 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.55□□□□□ -1.36
CD248Q9HCU0 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CD248Q9HCU0 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
CD248Q9HCU0 SMG1P5-202ENST00000529428 4219 ntBASIC6.55□□□□□ -1.36
CD248Q9HCU0 SMG1P2-201ENST00000566127 4221 ntBASIC6.55□□□□□ -1.36
CD248Q9HCU0 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
CD248Q9HCU0 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
CD248Q9HCU0 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CD248Q9HCU0 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
CD248Q9HCU0 AP000526.1-201ENST00000603308 1388 ntBASIC6.55□□□□□ -1.36
CD248Q9HCU0 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
CD248Q9HCU0 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CD248Q9HCU0 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CD248Q9HCU0 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
CD248Q9HCU0 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
CD248Q9HCU0 AL353763.1-201ENST00000624467 1628 ntBASIC6.54□□□□□ -1.36
CD248Q9HCU0 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CD248Q9HCU0 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.54□□□□□ -1.36
CD248Q9HCU0 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
CD248Q9HCU0 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.54□□□□□ -1.36
CD248Q9HCU0 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CD248Q9HCU0 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CD248Q9HCU0 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CD248Q9HCU0 AC021755.1-201ENST00000559747 1447 ntBASIC6.54□□□□□ -1.36
CD248Q9HCU0 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CD248Q9HCU0 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CD248Q9HCU0 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.54□□□□□ -1.36
CD248Q9HCU0 GNG5P2-201ENST00000372054 207 ntBASIC6.54□□□□□ -1.36
CD248Q9HCU0 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.54□□□□□ -1.36
CD248Q9HCU0 TCEA1P2-201ENST00000420496 906 ntBASIC6.54□□□□□ -1.36
CD248Q9HCU0 AC013262.1-201ENST00000426710 252 ntBASIC6.54□□□□□ -1.36
CD248Q9HCU0 AC115283.1-201ENST00000427353 400 ntBASIC6.54□□□□□ -1.36
CD248Q9HCU0 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC6.54□□□□□ -1.36
CD248Q9HCU0 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC6.54□□□□□ -1.36
CD248Q9HCU0 ELOCP3-201ENST00000439303 348 ntBASIC6.54□□□□□ -1.36
CD248Q9HCU0 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.54□□□□□ -1.36
CD248Q9HCU0 OR52Y1P-201ENST00000452418 828 ntBASIC6.54□□□□□ -1.36
CD248Q9HCU0 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.54□□□□□ -1.36
CD248Q9HCU0 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.54□□□□□ -1.36
CD248Q9HCU0 BET1P1-201ENST00000482276 359 ntBASIC6.54□□□□□ -1.36
CD248Q9HCU0 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CD248Q9HCU0 ATG10-AS1-201ENST00000504846 648 ntBASIC6.54□□□□□ -1.36
CD248Q9HCU0 MTCYBP20-201ENST00000524239 1129 ntBASIC6.54□□□□□ -1.36
CD248Q9HCU0 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.54□□□□□ -1.36
CD248Q9HCU0 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CD248Q9HCU0 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.54□□□□□ -1.36
CD248Q9HCU0 AP000619.2-201ENST00000546014 969 ntBASIC6.54□□□□□ -1.36
CD248Q9HCU0 GLRXP2-201ENST00000555594 321 ntBASIC6.54□□□□□ -1.36
CD248Q9HCU0 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC6.54□□□□□ -1.36
CD248Q9HCU0 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.54□□□□□ -1.36
CD248Q9HCU0 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.54□□□□□ -1.36
CD248Q9HCU0 Z99497.2-201ENST00000603634 310 ntBASIC6.54□□□□□ -1.36
CD248Q9HCU0 OR7A19P-201ENST00000608051 733 ntBASIC6.54□□□□□ -1.36
CD248Q9HCU0 AP001437.1-201ENST00000608783 456 ntBASIC6.54□□□□□ -1.36
CD248Q9HCU0 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.54□□□□□ -1.36
CD248Q9HCU0 AL669942.2-201ENST00000620352 697 ntBASIC6.54□□□□□ -1.36
CD248Q9HCU0 MIR6811-201ENST00000620409 58 ntBASIC6.54□□□□□ -1.36
CD248Q9HCU0 AC095038.2-201ENST00000621464 1070 ntBASIC6.54□□□□□ -1.36
CD248Q9HCU0 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.54□□□□□ -1.36
CD248Q9HCU0 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CD248Q9HCU0 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CD248Q9HCU0 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.54□□□□□ -1.36
CD248Q9HCU0 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CD248Q9HCU0 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CD248Q9HCU0 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.54□□□□□ -1.36
CD248Q9HCU0 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.54□□□□□ -1.36
CD248Q9HCU0 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CD248Q9HCU0 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.54□□□□□ -1.36
CD248Q9HCU0 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.54□□□□□ -1.36
CD248Q9HCU0 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CD248Q9HCU0 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.53□□□□□ -1.36
CD248Q9HCU0 AC092451.3-201ENST00000625067 1343 ntBASIC6.53□□□□□ -1.36
CD248Q9HCU0 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CD248Q9HCU0 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CD248Q9HCU0 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.53□□□□□ -1.36
CD248Q9HCU0 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
CD248Q9HCU0 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CD248Q9HCU0 MTND5P23-201ENST00000430812 1655 ntBASIC6.53□□□□□ -1.36
CD248Q9HCU0 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.53□□□□□ -1.36
CD248Q9HCU0 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CD248Q9HCU0 RNU4-39P-201ENST00000362455 127 ntBASIC6.53□□□□□ -1.36
CD248Q9HCU0 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.53□□□□□ -1.36
CD248Q9HCU0 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CD248Q9HCU0 AL049697.3-201ENST00000406493 982 ntBASIC6.53□□□□□ -1.36
CD248Q9HCU0 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.53□□□□□ -1.36
CD248Q9HCU0 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.53□□□□□ -1.36
CD248Q9HCU0 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CD248Q9HCU0 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC6.53□□□□□ -1.36
CD248Q9HCU0 TRGV7-201ENST00000427089 353 ntBASIC6.53□□□□□ -1.36
CD248Q9HCU0 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CD248Q9HCU0 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC6.53□□□□□ -1.36
CD248Q9HCU0 AL359265.1-201ENST00000440296 795 ntBASIC6.53□□□□□ -1.36
CD248Q9HCU0 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC6.53□□□□□ -1.36
CD248Q9HCU0 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.53□□□□□ -1.36
CD248Q9HCU0 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.53□□□□□ -1.36
CD248Q9HCU0 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.53□□□□□ -1.36
CD248Q9HCU0 USP9YP25-201ENST00000457708 443 ntBASIC6.53□□□□□ -1.36
CD248Q9HCU0 RPL12P31-201ENST00000478433 450 ntBASIC6.53□□□□□ -1.36
CD248Q9HCU0 NPM1P27-201ENST00000502784 830 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms