Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AP000919.1-201ENST00000582850 985 ntBASIC5.97□□□□□ -1.45
EBF3Q9H4W6 AC009303.3-201ENST00000591103 736 ntBASIC5.97□□□□□ -1.45
EBF3Q9H4W6 MIR132-201ENST00000591554 101 ntBASIC5.97□□□□□ -1.45
EBF3Q9H4W6 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.97□□□□□ -1.45
EBF3Q9H4W6 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.97□□□□□ -1.45
EBF3Q9H4W6 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.97□□□□□ -1.45
EBF3Q9H4W6 AC005899.7-201ENST00000618199 588 ntBASIC5.97□□□□□ -1.45
EBF3Q9H4W6 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.97□□□□□ -1.45
EBF3Q9H4W6 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
EBF3Q9H4W6 AC007683.2-201ENST00000624681 714 ntBASIC5.97□□□□□ -1.45
EBF3Q9H4W6 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.97□□□□□ -1.45
EBF3Q9H4W6 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
EBF3Q9H4W6 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
EBF3Q9H4W6 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
EBF3Q9H4W6 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
EBF3Q9H4W6 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.97□□□□□ -1.45
EBF3Q9H4W6 AP005435.3-201ENST00000531260 3198 ntBASIC5.97□□□□□ -1.45
EBF3Q9H4W6 Z95114.1-201ENST00000624264 14574 ntBASIC5.97□□□□□ -1.45
EBF3Q9H4W6 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.97□□□□□ -1.45
EBF3Q9H4W6 LINC02019-201ENST00000608605 2060 ntBASIC5.97□□□□□ -1.45
EBF3Q9H4W6 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
EBF3Q9H4W6 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
EBF3Q9H4W6 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
EBF3Q9H4W6 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
EBF3Q9H4W6 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.45
EBF3Q9H4W6 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
EBF3Q9H4W6 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
EBF3Q9H4W6 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
EBF3Q9H4W6 AC027279.1-201ENST00000568885 4284 ntBASIC5.96□□□□□ -1.46
EBF3Q9H4W6 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
EBF3Q9H4W6 AP000473.2-201ENST00000602659 1537 ntBASIC5.96□□□□□ -1.46
EBF3Q9H4W6 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.96□□□□□ -1.46
EBF3Q9H4W6 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
EBF3Q9H4W6 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
EBF3Q9H4W6 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.96□□□□□ -1.46
EBF3Q9H4W6 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.96□□□□□ -1.46
EBF3Q9H4W6 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.96□□□□□ -1.46
EBF3Q9H4W6 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.96□□□□□ -1.46
EBF3Q9H4W6 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.96□□□□□ -1.46
EBF3Q9H4W6 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.96□□□□□ -1.46
EBF3Q9H4W6 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC5.96□□□□□ -1.46
EBF3Q9H4W6 CUBNP2-201ENST00000443534 1139 ntBASIC5.96□□□□□ -1.46
EBF3Q9H4W6 SPRYD7P1-201ENST00000443861 570 ntBASIC5.96□□□□□ -1.46
EBF3Q9H4W6 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.96□□□□□ -1.46
EBF3Q9H4W6 AL162739.1-201ENST00000450606 307 ntBASIC5.96□□□□□ -1.46
EBF3Q9H4W6 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.96□□□□□ -1.46
EBF3Q9H4W6 AL603882.1-201ENST00000463059 681 ntBASIC5.96□□□□□ -1.46
EBF3Q9H4W6 RN7SL799P-201ENST00000475891 298 ntBASIC5.96□□□□□ -1.46
EBF3Q9H4W6 RPL38P3-201ENST00000484463 213 ntBASIC5.96□□□□□ -1.46
EBF3Q9H4W6 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.96□□□□□ -1.46
EBF3Q9H4W6 RN7SKP288-201ENST00000516227 268 ntBASIC5.96□□□□□ -1.46
EBF3Q9H4W6 AC139365.2-201ENST00000517972 253 ntBASIC5.96□□□□□ -1.46
EBF3Q9H4W6 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.96□□□□□ -1.46
EBF3Q9H4W6 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.96□□□□□ -1.46
EBF3Q9H4W6 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
EBF3Q9H4W6 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.96□□□□□ -1.46
EBF3Q9H4W6 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.96□□□□□ -1.46
EBF3Q9H4W6 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.96□□□□□ -1.46
EBF3Q9H4W6 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
EBF3Q9H4W6 MIR1269B-201ENST00000580405 75 ntBASIC5.96□□□□□ -1.46
EBF3Q9H4W6 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5.96□□□□□ -1.46
EBF3Q9H4W6 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.96□□□□□ -1.46
EBF3Q9H4W6 AL021707.7-201ENST00000607991 416 ntBASIC5.96□□□□□ -1.46
EBF3Q9H4W6 AC007204.2-201ENST00000615022 616 ntBASIC5.96□□□□□ -1.46
EBF3Q9H4W6 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.96□□□□□ -1.46
EBF3Q9H4W6 AC020763.5-201ENST00000623298 430 ntBASIC5.96□□□□□ -1.46
EBF3Q9H4W6 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.96□□□□□ -1.46
EBF3Q9H4W6 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
EBF3Q9H4W6 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
EBF3Q9H4W6 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
EBF3Q9H4W6 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
EBF3Q9H4W6 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
EBF3Q9H4W6 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.96□□□□□ -1.46
EBF3Q9H4W6 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.96□□□□□ -1.46
EBF3Q9H4W6 MFSD8-219ENST00000641228 2559 ntBASIC5.96□□□□□ -1.46
EBF3Q9H4W6 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
EBF3Q9H4W6 CR383656.5-201ENST00000547616 1340 ntBASIC5.96□□□□□ -1.46
EBF3Q9H4W6 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
EBF3Q9H4W6 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
EBF3Q9H4W6 AC004158.1-201ENST00000564508 4319 ntBASIC5.95□□□□□ -1.46
EBF3Q9H4W6 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 AL159987.1-201ENST00000347911 293 ntBASIC5.95□□□□□ -1.46
EBF3Q9H4W6 GCNT6-201ENST00000379591 934 ntBASIC5.95□□□□□ -1.46
EBF3Q9H4W6 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 RPS3AP38-201ENST00000435889 763 ntBASIC5.95□□□□□ -1.46
EBF3Q9H4W6 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 KRT8P51-201ENST00000438938 274 ntBASIC5.95□□□□□ -1.46
EBF3Q9H4W6 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.95□□□□□ -1.46
EBF3Q9H4W6 RPL35AP19-201ENST00000469425 329 ntBASIC5.95□□□□□ -1.46
EBF3Q9H4W6 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms