Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC017019.1-201ENST00000426129 261 ntBASIC6.12□□□□□ -1.43
CCSER1Q9C0I3 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.12□□□□□ -1.43
CCSER1Q9C0I3 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.12□□□□□ -1.43
CCSER1Q9C0I3 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.12□□□□□ -1.43
CCSER1Q9C0I3 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCSER1Q9C0I3 AC073909.1-201ENST00000447112 999 ntBASIC6.12□□□□□ -1.43
CCSER1Q9C0I3 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.12□□□□□ -1.43
CCSER1Q9C0I3 AL672138.1-201ENST00000450604 1015 ntBASIC6.12□□□□□ -1.43
CCSER1Q9C0I3 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.12□□□□□ -1.43
CCSER1Q9C0I3 RPSAP39-201ENST00000467439 883 ntBASIC6.12□□□□□ -1.43
CCSER1Q9C0I3 AP000797.2-201ENST00000475768 606 ntBASIC6.12□□□□□ -1.43
CCSER1Q9C0I3 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.12□□□□□ -1.43
CCSER1Q9C0I3 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.12□□□□□ -1.43
CCSER1Q9C0I3 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.12□□□□□ -1.43
CCSER1Q9C0I3 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
CCSER1Q9C0I3 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.12□□□□□ -1.43
CCSER1Q9C0I3 OR4A43P-201ENST00000532938 908 ntBASIC6.12□□□□□ -1.43
CCSER1Q9C0I3 AC078878.1-201ENST00000539832 958 ntBASIC6.12□□□□□ -1.43
CCSER1Q9C0I3 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.12□□□□□ -1.43
CCSER1Q9C0I3 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.12□□□□□ -1.43
CCSER1Q9C0I3 AC108738.1-201ENST00000603703 237 ntBASIC6.12□□□□□ -1.43
CCSER1Q9C0I3 LSM1P2-201ENST00000604911 322 ntBASIC6.12□□□□□ -1.43
CCSER1Q9C0I3 MIR6768-201ENST00000610734 72 ntBASIC6.12□□□□□ -1.43
CCSER1Q9C0I3 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.12□□□□□ -1.43
CCSER1Q9C0I3 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.12□□□□□ -1.43
CCSER1Q9C0I3 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCSER1Q9C0I3 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
CCSER1Q9C0I3 ADAM24P-201ENST00000398655 2101 ntBASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 AL121776.1-201ENST00000429337 372 ntBASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 OR2AF1P-201ENST00000454899 889 ntBASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 ABCC13-202ENST00000463099 3842 ntBASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 MTND6P2-201ENST00000512226 524 ntBASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 NPM1P21-201ENST00000513394 762 ntBASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 AC015720.2-201ENST00000567709 334 ntBASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 FO393422.1-201ENST00000603908 708 ntBASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 AC104695.2-201ENST00000605056 775 ntBASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 AC244107.2-201ENST00000611773 76 ntBASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 AP003072.5-201ENST00000623872 773 ntBASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 AC116158.1-201ENST00000560231 2129 ntBASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 AC003973.3-201ENST00000624863 2822 ntBASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CCSER1Q9C0I3 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCSER1Q9C0I3 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCSER1Q9C0I3 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCSER1Q9C0I3 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.1□□□□□ -1.43
CCSER1Q9C0I3 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCSER1Q9C0I3 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCSER1Q9C0I3 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCSER1Q9C0I3 U3.23-201ENST00000391132 200 ntBASIC6.1□□□□□ -1.43
CCSER1Q9C0I3 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.1□□□□□ -1.43
CCSER1Q9C0I3 SNORA81-201ENST00000408493 178 ntBASIC6.1□□□□□ -1.43
CCSER1Q9C0I3 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.1□□□□□ -1.43
CCSER1Q9C0I3 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCSER1Q9C0I3 RPL7AP49-201ENST00000429522 581 ntBASIC6.1□□□□□ -1.43
CCSER1Q9C0I3 AL591438.1-201ENST00000433508 581 ntBASIC6.1□□□□□ -1.43
CCSER1Q9C0I3 AC016772.1-201ENST00000444170 1261 ntBASIC6.1□□□□□ -1.43
CCSER1Q9C0I3 AC105399.1-202ENST00000447303 205 ntBASIC6.1□□□□□ -1.43
CCSER1Q9C0I3 YWHAEP1-201ENST00000453697 763 ntBASIC6.1□□□□□ -1.43
CCSER1Q9C0I3 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CCSER1Q9C0I3 AL136038.1-201ENST00000497246 351 ntBASIC6.1□□□□□ -1.43
CCSER1Q9C0I3 RN7SL466P-201ENST00000497546 295 ntBASIC6.1□□□□□ -1.43
CCSER1Q9C0I3 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.1□□□□□ -1.43
CCSER1Q9C0I3 IGBP1P4-201ENST00000503202 879 ntBASIC6.1□□□□□ -1.43
CCSER1Q9C0I3 HMGB1P44-201ENST00000508597 572 ntBASIC6.1□□□□□ -1.43
CCSER1Q9C0I3 AC026782.2-201ENST00000510845 636 ntBASIC6.1□□□□□ -1.43
CCSER1Q9C0I3 AC021193.1-201ENST00000511607 420 ntBASIC6.1□□□□□ -1.43
CCSER1Q9C0I3 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.1□□□□□ -1.43
CCSER1Q9C0I3 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.1□□□□□ -1.43
CCSER1Q9C0I3 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.1□□□□□ -1.43
CCSER1Q9C0I3 SNORD95-201ENST00000579879 68 ntBASIC6.1□□□□□ -1.43
CCSER1Q9C0I3 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.1□□□□□ -1.43
CCSER1Q9C0I3 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
CCSER1Q9C0I3 AC004656.1-201ENST00000568479 4951 ntBASIC6.1□□□□□ -1.43
CCSER1Q9C0I3 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.1□□□□□ -1.43
CCSER1Q9C0I3 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.1□□□□□ -1.43
CCSER1Q9C0I3 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms