Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 GRB10-209ENST00000406641 2700 ntTSL 5 BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 AL355974.1-201ENST00000618896 1708 ntBASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 LUCAT1-203ENST00000513626 2672 ntTSL 2 BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 ULBP1-201ENST00000229708 3142 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 APOL3-202ENST00000361710 3563 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 AC126773.4-201ENST00000612545 3043 ntBASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 AMPH-202ENST00000356264 3418 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 ODF2-209ENST00000434106 3890 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 NEK10-201ENST00000295720 2871 ntTSL 2 BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 CR383658.2-201ENST00000547576 1525 ntBASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 RPGR-201ENST00000318842 3108 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 DDX21-201ENST00000354185 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 AOX1-202ENST00000374700 5074 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 CDHR3-211ENST00000478080 2633 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 SH2D4B-202ENST00000339284 3983 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 MAPK10-290ENST00000641237 2826 ntBASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 OR51D1-202ENST00000641817 3561 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 MBD3L1-201ENST00000305625 748 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 Y_RNA.128-201ENST00000363391 112 ntBASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 SNORA33.2-201ENST00000365413 134 ntBASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 SNORA4.3-201ENST00000365564 137 ntBASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 SRI-202ENST00000394641 653 ntTSL 2 BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 RNU2-39P-201ENST00000410604 198 ntBASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 NRBF2P2-201ENST00000413087 861 ntBASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 AL353193.1-201ENST00000421444 268 ntBASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 FDPSP1-201ENST00000424976 1071 ntBASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 AC005189.1-201ENST00000431286 310 ntBASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 AC007563.3-201ENST00000433233 371 ntBASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 OR52B5P-201ENST00000435337 951 ntBASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 AL161636.2-201ENST00000445179 927 ntBASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 YWHAQP9-201ENST00000445891 512 ntBASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 HMGB1P7-201ENST00000450921 612 ntBASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 CEACAMP4-201ENST00000457676 421 ntBASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 SNX18P26-201ENST00000458433 740 ntBASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 AC007998.1-201ENST00000474156 672 ntBASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 NDUFS5P2-201ENST00000484004 306 ntBASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 FTH1P23-201ENST00000492727 550 ntBASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 RPL15P21-201ENST00000495592 567 ntBASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 AC231760.1-201ENST00000498002 260 ntBASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 PSMA2P2-201ENST00000504319 686 ntBASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 AC093664.1-201ENST00000511779 289 ntBASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 AC010486.1-201ENST00000511793 424 ntBASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 SNORD46.2-201ENST00000516021 102 ntBASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 OR4C2P-201ENST00000530855 1064 ntBASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 AC011611.1-201ENST00000552179 197 ntBASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 MIR3691-201ENST00000578066 90 ntBASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 SKA2-203ENST00000578105 689 ntTSL 2 BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 AC233702.7-202ENST00000582941 211 ntBASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 AC068790.7-201ENST00000602347 528 ntBASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 AC113143.2-201ENST00000603849 394 ntBASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 Z95327.3-201ENST00000610385 572 ntBASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 AP003400.3-201ENST00000624904 346 ntBASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 MTND4LP32-201ENST00000636111 270 ntBASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 AC073525.1-203ENST00000547040 2631 ntTSL 2 BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 RAB5B-210ENST00000553116 3322 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 AP003972.1-201ENST00000625192 5446 ntBASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 ERG-205ENST00000398910 4954 ntTSL 5 BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms