Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 NXF4-202ENST00000416098 1465 ntBASIC5.71□□□□□ -1.49
SSBP3Q9BWW4 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC5.71□□□□□ -1.49
SSBP3Q9BWW4 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SSBP3Q9BWW4 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 RN7SKP130-201ENST00000364924 301 ntBASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 RN7SKP161-201ENST00000411110 305 ntBASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 FNDC3CP-201ENST00000420795 1155 ntBASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 PTPN2P1-201ENST00000423212 1072 ntBASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 AHCYP8-201ENST00000425108 209 ntBASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 AP003385.1-201ENST00000426387 893 ntBASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 AC097721.1-201ENST00000427150 1253 ntBASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 AL022324.2-201ENST00000434827 780 ntBASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 AL592437.1-201ENST00000443781 492 ntBASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 WDR82P2-201ENST00000444540 928 ntBASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 HBG2-204ENST00000444587 307 ntTSL 2 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 EEF1E1P1-201ENST00000446998 430 ntBASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 MTND5P20-201ENST00000448677 143 ntBASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 OR51B8P-201ENST00000449892 769 ntBASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 RPL31P11-202ENST00000454082 372 ntBASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 AC236972.4-201ENST00000458091 963 ntBASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 AC135721.2-201ENST00000464237 300 ntBASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 SETP11-201ENST00000473027 690 ntBASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 RPL37P25-201ENST00000507308 276 ntBASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 RNU6-678P-201ENST00000516832 109 ntBASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 Y_RNA.702-201ENST00000516843 96 ntBASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 AC116553.2-201ENST00000564203 463 ntBASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 AC026951.2-201ENST00000613847 241 ntBASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 AC013476.2-201ENST00000614456 459 ntBASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 AC138932.5-201ENST00000617759 563 ntBASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 AC025287.2-201ENST00000621911 668 ntBASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 AL138693.1-201ENST00000622219 129 ntBASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 OR10AB1P-202ENST00000641219 1686 ntBASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 DMD-202ENST00000343523 5623 ntTSL 5 BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SSBP3Q9BWW4 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms