Protein–RNA interactions for Protein: Q9BQY4

RHOXF2, Rhox homeobox family member 2, humanhuman

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF2Q9BQY4 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RHOXF2Q9BQY4 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RHOXF2Q9BQY4 CASC19-238ENST00000641523 1558 ntBASIC5.67□□□□□ -1.5
RHOXF2Q9BQY4 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
RHOXF2Q9BQY4 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RHOXF2Q9BQY4 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.67□□□□□ -1.5
RHOXF2Q9BQY4 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
RHOXF2Q9BQY4 AC079298.1-201ENST00000625026 1619 ntBASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 TET1P1-201ENST00000426627 2301 ntBASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 OR9G4-201ENST00000302957 984 ntBASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 AC006335.2-201ENST00000437993 330 ntBASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 AC068491.1-201ENST00000449539 1241 ntBASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 AC098583.1-201ENST00000480875 255 ntBASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 RN7SKP238-201ENST00000516483 249 ntBASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 RNA5SP441-201ENST00000516809 88 ntBASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 AC018552.1-201ENST00000562099 811 ntBASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 AC092332.1-201ENST00000563684 829 ntBASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 AC063977.5-201ENST00000601044 974 ntBASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 AC012676.3-201ENST00000614983 479 ntBASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 BNIP3P41-202ENST00000616656 861 ntBASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 AC037198.3-201ENST00000616754 526 ntBASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 MIR6839-201ENST00000620425 113 ntBASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 MIR6813-201ENST00000621638 56 ntBASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 SOCS5P3-201ENST00000425115 1576 ntBASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 AL929601.4-201ENST00000613011 1341 ntBASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 AC063976.2-201ENST00000425667 3556 ntBASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RHOXF2Q9BQY4 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 TCP1P3-201ENST00000414406 1498 ntBASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 AC017079.1-201ENST00000333650 415 ntBASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 RN7SKP184-201ENST00000362348 333 ntBASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 GAPDHP15-201ENST00000398586 975 ntBASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 SNRPFP2-201ENST00000440710 251 ntBASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 AL356121.1-201ENST00000442911 156 ntBASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 AC073909.1-201ENST00000447112 999 ntBASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 AL591363.1-201ENST00000450091 483 ntBASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 AC098847.1-201ENST00000473094 348 ntBASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 RN7SL612P-201ENST00000497704 295 ntBASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 AL356801.1-201ENST00000559320 294 ntBASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 AC025574.2-201ENST00000615621 514 ntBASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 AL357140.4-201ENST00000636827 412 ntBASIC5.65□□□□□ -1.5
RHOXF2Q9BQY4 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
RHOXF2Q9BQY4 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.65□□□□□ -1.51
RHOXF2Q9BQY4 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms