Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 GLYATL1P2-202ENST00000588046 902 ntBASIC5.63□□□□□ -1.51
SNX18Q96RF0 NPIPB1P-202ENST00000588786 828 ntBASIC5.63□□□□□ -1.51
SNX18Q96RF0 DYNLL1P1-201ENST00000595442 269 ntBASIC5.63□□□□□ -1.51
SNX18Q96RF0 BMS1P7-201ENST00000602440 1052 ntBASIC5.63□□□□□ -1.51
SNX18Q96RF0 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.63□□□□□ -1.51
SNX18Q96RF0 AL160237.3-201ENST00000604114 1013 ntBASIC5.63□□□□□ -1.51
SNX18Q96RF0 AC073046.2-201ENST00000604756 527 ntBASIC5.63□□□□□ -1.51
SNX18Q96RF0 AC006924.1-201ENST00000610750 559 ntBASIC5.63□□□□□ -1.51
SNX18Q96RF0 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.63□□□□□ -1.51
SNX18Q96RF0 SNORA11.6-201ENST00000619030 128 ntBASIC5.63□□□□□ -1.51
SNX18Q96RF0 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SNX18Q96RF0 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SNX18Q96RF0 AC003992.1-201ENST00000635364 557 ntBASIC5.63□□□□□ -1.51
SNX18Q96RF0 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SNX18Q96RF0 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SNX18Q96RF0 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
SNX18Q96RF0 AL359715.3-201ENST00000569267 2123 ntBASIC5.63□□□□□ -1.51
SNX18Q96RF0 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SNX18Q96RF0 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.63□□□□□ -1.51
SNX18Q96RF0 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.63□□□□□ -1.51
SNX18Q96RF0 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SNX18Q96RF0 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.63□□□□□ -1.51
SNX18Q96RF0 AL132656.3-201ENST00000606384 1595 ntBASIC5.63□□□□□ -1.51
SNX18Q96RF0 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.63□□□□□ -1.51
SNX18Q96RF0 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SNX18Q96RF0 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SNX18Q96RF0 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SNX18Q96RF0 AC093909.5-201ENST00000621839 1799 ntBASIC5.62□□□□□ -1.51
SNX18Q96RF0 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.62□□□□□ -1.51
SNX18Q96RF0 AC096921.2-201ENST00000561507 1916 ntBASIC5.62□□□□□ -1.51
SNX18Q96RF0 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SNX18Q96RF0 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SNX18Q96RF0 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SNX18Q96RF0 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SNX18Q96RF0 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
SNX18Q96RF0 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SNX18Q96RF0 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.62□□□□□ -1.51
SNX18Q96RF0 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SNX18Q96RF0 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SNX18Q96RF0 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SNX18Q96RF0 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.62□□□□□ -1.51
SNX18Q96RF0 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.62□□□□□ -1.51
SNX18Q96RF0 RNU6-468P-201ENST00000384003 109 ntBASIC5.62□□□□□ -1.51
SNX18Q96RF0 MTCO2P31-201ENST00000402702 684 ntBASIC5.62□□□□□ -1.51
SNX18Q96RF0 NPM1P38-201ENST00000403835 865 ntBASIC5.62□□□□□ -1.51
SNX18Q96RF0 RN7SKP151-201ENST00000410230 316 ntBASIC5.62□□□□□ -1.51
SNX18Q96RF0 SNORA79B-201ENST00000410557 148 ntBASIC5.62□□□□□ -1.51
SNX18Q96RF0 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.62□□□□□ -1.51
SNX18Q96RF0 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.62□□□□□ -1.51
SNX18Q96RF0 GPN3P1-201ENST00000423883 535 ntBASIC5.62□□□□□ -1.51
SNX18Q96RF0 NANOGP5-201ENST00000424456 877 ntBASIC5.62□□□□□ -1.51
SNX18Q96RF0 AC016027.5-201ENST00000427227 210 ntBASIC5.62□□□□□ -1.51
SNX18Q96RF0 HMGN2P27-201ENST00000427352 270 ntBASIC5.62□□□□□ -1.51
SNX18Q96RF0 RPS27AP6-201ENST00000427962 448 ntBASIC5.62□□□□□ -1.51
SNX18Q96RF0 RPL12P28-201ENST00000430852 489 ntBASIC5.62□□□□□ -1.51
SNX18Q96RF0 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.62□□□□□ -1.51
SNX18Q96RF0 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SNX18Q96RF0 MTND2P22-201ENST00000444325 1033 ntBASIC5.62□□□□□ -1.51
SNX18Q96RF0 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.62□□□□□ -1.51
SNX18Q96RF0 RPL6P5-201ENST00000445678 828 ntBASIC5.62□□□□□ -1.51
SNX18Q96RF0 AC097359.1-201ENST00000447946 463 ntBASIC5.62□□□□□ -1.51
SNX18Q96RF0 AL031313.1-201ENST00000448435 256 ntBASIC5.62□□□□□ -1.51
SNX18Q96RF0 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SNX18Q96RF0 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.62□□□□□ -1.51
SNX18Q96RF0 AC118758.1-202ENST00000454719 225 ntBASIC5.62□□□□□ -1.51
SNX18Q96RF0 AC093166.2-201ENST00000455969 1017 ntBASIC5.62□□□□□ -1.51
SNX18Q96RF0 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.62□□□□□ -1.51
SNX18Q96RF0 SNORD11.1-201ENST00000459482 85 ntBASIC5.62□□□□□ -1.51
SNX18Q96RF0 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.62□□□□□ -1.51
SNX18Q96RF0 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.62□□□□□ -1.51
SNX18Q96RF0 AL035690.1-201ENST00000490892 383 ntBASIC5.62□□□□□ -1.51
SNX18Q96RF0 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.62□□□□□ -1.51
SNX18Q96RF0 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
SNX18Q96RF0 AC093664.1-201ENST00000511779 289 ntBASIC5.62□□□□□ -1.51
SNX18Q96RF0 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.62□□□□□ -1.51
SNX18Q96RF0 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.62□□□□□ -1.51
SNX18Q96RF0 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.62□□□□□ -1.51
SNX18Q96RF0 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.62□□□□□ -1.51
SNX18Q96RF0 GTF2IP11-201ENST00000526931 420 ntBASIC5.62□□□□□ -1.51
SNX18Q96RF0 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SNX18Q96RF0 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.62□□□□□ -1.51
SNX18Q96RF0 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.62□□□□□ -1.51
SNX18Q96RF0 MTCYBP23-201ENST00000558717 1102 ntBASIC5.62□□□□□ -1.51
SNX18Q96RF0 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.62□□□□□ -1.51
SNX18Q96RF0 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.62□□□□□ -1.51
SNX18Q96RF0 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.62□□□□□ -1.51
SNX18Q96RF0 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC5.62□□□□□ -1.51
SNX18Q96RF0 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.62□□□□□ -1.51
SNX18Q96RF0 AC011891.2-201ENST00000604949 397 ntBASIC5.62□□□□□ -1.51
SNX18Q96RF0 AC073137.1-201ENST00000605636 634 ntBASIC5.62□□□□□ -1.51
SNX18Q96RF0 AC106052.1-201ENST00000608029 497 ntBASIC5.62□□□□□ -1.51
SNX18Q96RF0 AL589743.6-201ENST00000611025 117 ntBASIC5.62□□□□□ -1.51
SNX18Q96RF0 AC012676.3-201ENST00000614983 479 ntBASIC5.62□□□□□ -1.51
SNX18Q96RF0 MIR6806-201ENST00000622141 64 ntBASIC5.62□□□□□ -1.51
SNX18Q96RF0 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.62□□□□□ -1.51
SNX18Q96RF0 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SNX18Q96RF0 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SNX18Q96RF0 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.62□□□□□ -1.51
SNX18Q96RF0 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SNX18Q96RF0 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms