Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.58□□□□□ -1.36
PGBD1Q96JS3 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.58□□□□□ -1.36
PGBD1Q96JS3 AC004223.2-201ENST00000590309 544 ntBASIC6.58□□□□□ -1.36
PGBD1Q96JS3 AC020915.5-201ENST00000596836 964 ntBASIC6.58□□□□□ -1.36
PGBD1Q96JS3 AC096947.1-201ENST00000603233 470 ntBASIC6.58□□□□□ -1.36
PGBD1Q96JS3 RN7SL787P-201ENST00000613000 284 ntBASIC6.58□□□□□ -1.36
PGBD1Q96JS3 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.58□□□□□ -1.36
PGBD1Q96JS3 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.58□□□□□ -1.36
PGBD1Q96JS3 AC010872.1-201ENST00000624225 675 ntBASIC6.58□□□□□ -1.36
PGBD1Q96JS3 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.58□□□□□ -1.36
PGBD1Q96JS3 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.58□□□□□ -1.36
PGBD1Q96JS3 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC6.58□□□□□ -1.36
PGBD1Q96JS3 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.58□□□□□ -1.36
PGBD1Q96JS3 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC6.58□□□□□ -1.36
PGBD1Q96JS3 KARSP1-201ENST00000451871 1752 ntBASIC6.58□□□□□ -1.36
PGBD1Q96JS3 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.58□□□□□ -1.36
PGBD1Q96JS3 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
PGBD1Q96JS3 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PGBD1Q96JS3 SRRM1P3-201ENST00000426911 2678 ntBASIC6.58□□□□□ -1.36
PGBD1Q96JS3 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PGBD1Q96JS3 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PGBD1Q96JS3 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
PGBD1Q96JS3 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PGBD1Q96JS3 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
PGBD1Q96JS3 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 UGT2B24P-201ENST00000514441 1597 ntBASIC6.57□□□□□ -1.36
PGBD1Q96JS3 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 AL137058.3-201ENST00000624531 3099 ntBASIC6.57□□□□□ -1.36
PGBD1Q96JS3 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 RNA5SP326-201ENST00000363209 110 ntBASIC6.57□□□□□ -1.36
PGBD1Q96JS3 RN7SKP269-201ENST00000365545 319 ntBASIC6.57□□□□□ -1.36
PGBD1Q96JS3 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 RPS3AP2-201ENST00000407190 754 ntBASIC6.57□□□□□ -1.36
PGBD1Q96JS3 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 RNU6-564P-201ENST00000410983 104 ntBASIC6.57□□□□□ -1.36
PGBD1Q96JS3 AC096921.1-201ENST00000411661 375 ntBASIC6.57□□□□□ -1.36
PGBD1Q96JS3 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.57□□□□□ -1.36
PGBD1Q96JS3 AC093155.2-201ENST00000420734 937 ntBASIC6.57□□□□□ -1.36
PGBD1Q96JS3 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 MTCO2P17-201ENST00000424336 677 ntBASIC6.57□□□□□ -1.36
PGBD1Q96JS3 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 MTCO1P57-201ENST00000432182 261 ntBASIC6.57□□□□□ -1.36
PGBD1Q96JS3 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 EEF1B2P6-201ENST00000445713 673 ntBASIC6.57□□□□□ -1.36
PGBD1Q96JS3 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 EIF2S2P4-201ENST00000461070 984 ntBASIC6.57□□□□□ -1.36
PGBD1Q96JS3 AC022215.1-201ENST00000481770 362 ntBASIC6.57□□□□□ -1.36
PGBD1Q96JS3 RPS7P6-201ENST00000485777 579 ntBASIC6.57□□□□□ -1.36
PGBD1Q96JS3 RPL7P51-201ENST00000490532 749 ntBASIC6.57□□□□□ -1.36
PGBD1Q96JS3 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 DUTP1-201ENST00000493631 470 ntBASIC6.57□□□□□ -1.36
PGBD1Q96JS3 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 HSPE1P2-201ENST00000554777 306 ntBASIC6.57□□□□□ -1.36
PGBD1Q96JS3 DHFRP1-201ENST00000579682 559 ntBASIC6.57□□□□□ -1.36
PGBD1Q96JS3 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 AC018645.2-201ENST00000609151 472 ntBASIC6.57□□□□□ -1.36
PGBD1Q96JS3 AC009120.7-201ENST00000623452 780 ntBASIC6.57□□□□□ -1.36
PGBD1Q96JS3 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 AL592429.1-201ENST00000403909 1473 ntBASIC6.57□□□□□ -1.36
PGBD1Q96JS3 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PGBD1Q96JS3 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.56□□□□□ -1.36
PGBD1Q96JS3 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
PGBD1Q96JS3 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PGBD1Q96JS3 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
PGBD1Q96JS3 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PGBD1Q96JS3 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PGBD1Q96JS3 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PGBD1Q96JS3 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.56□□□□□ -1.36
PGBD1Q96JS3 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PGBD1Q96JS3 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
PGBD1Q96JS3 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC6.56□□□□□ -1.36
PGBD1Q96JS3 MIR130A-201ENST00000385274 89 ntBASIC6.56□□□□□ -1.36
PGBD1Q96JS3 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
PGBD1Q96JS3 NIFKP3-201ENST00000417799 865 ntBASIC6.56□□□□□ -1.36
PGBD1Q96JS3 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms