Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC007842.1-201ENST00000597336 2039 ntBASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 AC090220.1-201ENST00000593078 1699 ntBASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 PCAT14-202ENST00000627127 3935 ntBASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 AC073909.1-201ENST00000447112 999 ntBASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 AC005077.1-201ENST00000449226 375 ntBASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 OR2AF1P-201ENST00000454899 889 ntBASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 AC084754.1-201ENST00000463466 464 ntBASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 RPL7P51-201ENST00000490532 749 ntBASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 IGBP1P4-201ENST00000503202 879 ntBASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 IGLVIV-64-201ENST00000518581 301 ntBASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 AP006245.2-201ENST00000522004 300 ntBASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 AC027369.5-201ENST00000533838 755 ntBASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 AC108865.2-201ENST00000606881 432 ntBASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 AC245014.3-201ENST00000618589 347 ntBASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 AC024884.1-201ENST00000620583 399 ntBASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 AC026124.2-201ENST00000621847 656 ntBASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 MIR4302-201ENST00000638058 60 ntBASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 PSG10P-201ENST00000501199 1500 ntBASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CCDC112Q8NEF3 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 RNA5SP30-201ENST00000365552 115 ntBASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 SNORA51.9-201ENST00000384295 124 ntBASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 NAP1L4P2-201ENST00000425958 899 ntBASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 ATP5LP2-201ENST00000440646 311 ntBASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 ACA64.1-201ENST00000459171 127 ntBASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 RN7SL273P-201ENST00000481561 299 ntBASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 AC025458.1-201ENST00000506046 166 ntBASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 DUTP7-201ENST00000507982 486 ntBASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 HMGN1P9-201ENST00000515212 298 ntBASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 RN7SKP35-201ENST00000517210 151 ntBASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 TRIM77BP-201ENST00000524985 1119 ntBASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 MIR6809-201ENST00000612189 116 ntBASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 AC004801.6-201ENST00000616571 978 ntBASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 AL357153.4-201ENST00000620487 1016 ntBASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 AC144833.1-201ENST00000567953 4089 ntBASIC6.03□□□□□ -1.44
CCDC112Q8NEF3 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 MT-RNR2-201ENST00000387347 1559 ntBASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 RNA5SP510-201ENST00000364697 99 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms