Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 RNA5SP433-201ENST00000364491 114 ntBASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 AC066692.1-201ENST00000421721 457 ntBASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 AC073909.1-201ENST00000447112 999 ntBASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 AL596266.1-201ENST00000448132 400 ntBASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 AC019084.1-201ENST00000457337 432 ntBASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 CTSLP6-201ENST00000458273 1002 ntBASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 SEPT10P1-201ENST00000517342 1162 ntBASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 AP000648.1-201ENST00000529682 397 ntBASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 HMGB1P42-201ENST00000532126 553 ntBASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 AL031601.1-201ENST00000605702 394 ntBASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 AC010632.3-201ENST00000611377 369 ntBASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 MIR7109-201ENST00000613748 65 ntBASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 AC012078.1-201ENST00000405035 1646 ntBASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 AP001642.1-201ENST00000624727 2117 ntBASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 AL731566.1-201ENST00000620490 1937 ntBASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 CASC19-248ENST00000641674 1356 ntBASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 AC211486.3-201ENST00000412694 621 ntBASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 AC245060.4-201ENST00000413293 1121 ntBASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 AC010740.1-201ENST00000417035 684 ntBASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 AL512637.1-201ENST00000439523 1231 ntBASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 RPSAP41-201ENST00000439695 860 ntBASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 AZGP1P2-201ENST00000454506 345 ntBASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 AC021733.2-201ENST00000518830 497 ntBASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 AC079064.1-201ENST00000528365 362 ntBASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 RN7SL544P-201ENST00000617232 284 ntBASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 AC026367.3-201ENST00000619032 590 ntBASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 RN7SL763P-201ENST00000620922 284 ntBASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC50Q8IVM0 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC50Q8IVM0 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CCDC50Q8IVM0 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC50Q8IVM0 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC50Q8IVM0 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC50Q8IVM0 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.78□□□□□ -1.48
CCDC50Q8IVM0 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC50Q8IVM0 OR7E101P-201ENST00000400428 513 ntBASIC5.78□□□□□ -1.48
CCDC50Q8IVM0 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC50Q8IVM0 AC127526.2-201ENST00000426436 775 ntBASIC5.78□□□□□ -1.48
CCDC50Q8IVM0 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC50Q8IVM0 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC50Q8IVM0 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC50Q8IVM0 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC50Q8IVM0 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC50Q8IVM0 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC50Q8IVM0 AL359839.1-201ENST00000451975 1160 ntBASIC5.78□□□□□ -1.48
CCDC50Q8IVM0 RN7SL168P-201ENST00000463821 279 ntBASIC5.78□□□□□ -1.48
CCDC50Q8IVM0 RPS23P6-201ENST00000466136 431 ntBASIC5.78□□□□□ -1.48
CCDC50Q8IVM0 RN7SL583P-201ENST00000475692 287 ntBASIC5.78□□□□□ -1.48
CCDC50Q8IVM0 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms