Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC016772.1-201ENST00000444170 1261 ntBASIC4.91□□□□□ -1.62
LRRC28Q86X40 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.91□□□□□ -1.62
LRRC28Q86X40 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.91□□□□□ -1.62
LRRC28Q86X40 IGBP1P3-201ENST00000447449 1000 ntBASIC4.91□□□□□ -1.62
LRRC28Q86X40 AC021660.1-201ENST00000465006 554 ntBASIC4.91□□□□□ -1.62
LRRC28Q86X40 UBFD1P1-201ENST00000473259 814 ntBASIC4.91□□□□□ -1.62
LRRC28Q86X40 PPIAP19-201ENST00000486414 492 ntBASIC4.91□□□□□ -1.62
LRRC28Q86X40 RPL7P51-201ENST00000490532 749 ntBASIC4.91□□□□□ -1.62
LRRC28Q86X40 DUTP1-201ENST00000493631 470 ntBASIC4.91□□□□□ -1.62
LRRC28Q86X40 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.91□□□□□ -1.62
LRRC28Q86X40 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LRRC28Q86X40 PMS2P3-207ENST00000529061 717 ntBASIC4.91□□□□□ -1.62
LRRC28Q86X40 GNG2-208ENST00000554875 430 ntTSL 5 BASIC4.91□□□□□ -1.62
LRRC28Q86X40 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.91□□□□□ -1.62
LRRC28Q86X40 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.91□□□□□ -1.62
LRRC28Q86X40 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.91□□□□□ -1.62
LRRC28Q86X40 MTCYBP13-201ENST00000578634 1093 ntBASIC4.91□□□□□ -1.62
LRRC28Q86X40 AP001496.3-201ENST00000580230 913 ntBASIC4.91□□□□□ -1.62
LRRC28Q86X40 MIR4260-201ENST00000583107 67 ntBASIC4.91□□□□□ -1.62
LRRC28Q86X40 AC006272.2-201ENST00000594725 163 ntBASIC4.91□□□□□ -1.62
LRRC28Q86X40 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LRRC28Q86X40 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LRRC28Q86X40 AL357153.4-201ENST00000620487 1016 ntBASIC4.91□□□□□ -1.62
LRRC28Q86X40 AC127024.6-201ENST00000621598 424 ntBASIC4.91□□□□□ -1.62
LRRC28Q86X40 uc_338.7-201ENST00000621834 124 ntBASIC4.91□□□□□ -1.62
LRRC28Q86X40 AC103703.1-201ENST00000634783 663 ntBASIC4.91□□□□□ -1.62
LRRC28Q86X40 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
LRRC28Q86X40 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.91□□□□□ -1.62
LRRC28Q86X40 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LRRC28Q86X40 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.91□□□□□ -1.62
LRRC28Q86X40 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
LRRC28Q86X40 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.9□□□□□ -1.62
LRRC28Q86X40 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
LRRC28Q86X40 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.9□□□□□ -1.62
LRRC28Q86X40 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.62
LRRC28Q86X40 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
LRRC28Q86X40 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
LRRC28Q86X40 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.9□□□□□ -1.62
LRRC28Q86X40 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.9□□□□□ -1.62
LRRC28Q86X40 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
LRRC28Q86X40 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
LRRC28Q86X40 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
LRRC28Q86X40 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
LRRC28Q86X40 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
LRRC28Q86X40 AC112198.2-201ENST00000426589 6996 ntBASIC4.9□□□□□ -1.62
LRRC28Q86X40 MIR375-201ENST00000362103 64 ntBASIC4.9□□□□□ -1.63
LRRC28Q86X40 RNA5SP500-201ENST00000364486 119 ntBASIC4.9□□□□□ -1.63
LRRC28Q86X40 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.9□□□□□ -1.63
LRRC28Q86X40 LSM5-203ENST00000409782 649 ntTSL 5 BASIC4.9□□□□□ -1.63
LRRC28Q86X40 RN7SKP29-201ENST00000410957 272 ntBASIC4.9□□□□□ -1.63
LRRC28Q86X40 CTSL3P-202ENST00000412179 788 ntBASIC4.9□□□□□ -1.63
LRRC28Q86X40 COX5BP7-201ENST00000414780 274 ntBASIC4.9□□□□□ -1.63
LRRC28Q86X40 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.9□□□□□ -1.63
LRRC28Q86X40 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.9□□□□□ -1.63
LRRC28Q86X40 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.9□□□□□ -1.63
LRRC28Q86X40 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
LRRC28Q86X40 NANOGP9-201ENST00000439890 892 ntBASIC4.9□□□□□ -1.63
LRRC28Q86X40 PRPF38AP1-201ENST00000451976 933 ntBASIC4.9□□□□□ -1.63
LRRC28Q86X40 SEPT7P3-201ENST00000455017 621 ntBASIC4.9□□□□□ -1.63
LRRC28Q86X40 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC4.9□□□□□ -1.63
LRRC28Q86X40 RPS17P15-201ENST00000475609 349 ntBASIC4.9□□□□□ -1.63
LRRC28Q86X40 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.9□□□□□ -1.63
LRRC28Q86X40 MYL12BP2-201ENST00000503948 512 ntBASIC4.9□□□□□ -1.63
LRRC28Q86X40 MTATP6P1-201ENST00000514057 681 ntBASIC4.9□□□□□ -1.63
LRRC28Q86X40 RNU6-513P-201ENST00000516104 104 ntBASIC4.9□□□□□ -1.63
LRRC28Q86X40 SNORA70.20-201ENST00000516848 126 ntBASIC4.9□□□□□ -1.63
LRRC28Q86X40 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LRRC28Q86X40 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC4.9□□□□□ -1.63
LRRC28Q86X40 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.9□□□□□ -1.63
LRRC28Q86X40 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.9□□□□□ -1.63
LRRC28Q86X40 MIR4472-2-201ENST00000582069 67 ntBASIC4.9□□□□□ -1.63
LRRC28Q86X40 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.9□□□□□ -1.63
LRRC28Q86X40 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.9□□□□□ -1.63
LRRC28Q86X40 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
LRRC28Q86X40 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.9□□□□□ -1.63
LRRC28Q86X40 AC022417.1-201ENST00000624768 1303 ntBASIC4.9□□□□□ -1.63
LRRC28Q86X40 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LRRC28Q86X40 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.9□□□□□ -1.63
LRRC28Q86X40 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
LRRC28Q86X40 TRIM51GP-201ENST00000534741 1350 ntBASIC4.9□□□□□ -1.63
LRRC28Q86X40 AC116158.1-201ENST00000560231 2129 ntBASIC4.9□□□□□ -1.63
LRRC28Q86X40 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LRRC28Q86X40 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.9□□□□□ -1.63
LRRC28Q86X40 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.89□□□□□ -1.63
LRRC28Q86X40 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
LRRC28Q86X40 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.89□□□□□ -1.63
LRRC28Q86X40 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LRRC28Q86X40 THAP12P5-201ENST00000405864 2275 ntBASIC4.89□□□□□ -1.63
LRRC28Q86X40 TCP1P3-201ENST00000414406 1498 ntBASIC4.89□□□□□ -1.63
LRRC28Q86X40 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LRRC28Q86X40 OR13C1P-202ENST00000641378 2919 ntBASIC4.89□□□□□ -1.63
LRRC28Q86X40 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LRRC28Q86X40 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.89□□□□□ -1.63
LRRC28Q86X40 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LRRC28Q86X40 RN7SKP292-201ENST00000365522 317 ntBASIC4.89□□□□□ -1.63
LRRC28Q86X40 AC007618.1-201ENST00000366455 732 ntBASIC4.89□□□□□ -1.63
LRRC28Q86X40 RPL21P67-201ENST00000402896 478 ntBASIC4.89□□□□□ -1.63
LRRC28Q86X40 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC4.89□□□□□ -1.63
LRRC28Q86X40 MRPL53P1-201ENST00000414323 319 ntBASIC4.89□□□□□ -1.63
LRRC28Q86X40 SDHDP6-201ENST00000414693 480 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms