Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 AC006065.1-201ENST00000422539 802 ntBASIC5.29□□□□□ -1.56
RIF1Q5UIP0 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 RPL34P20-201ENST00000442771 351 ntBASIC5.29□□□□□ -1.56
RIF1Q5UIP0 EIF2S2P2-201ENST00000447161 982 ntBASIC5.29□□□□□ -1.56
RIF1Q5UIP0 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 AL161637.1-201ENST00000622380 412 ntBASIC5.29□□□□□ -1.56
RIF1Q5UIP0 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 KARSP3-201ENST00000571212 1504 ntBASIC5.29□□□□□ -1.56
RIF1Q5UIP0 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 AC009166.2-201ENST00000624410 2833 ntBASIC5.29□□□□□ -1.56
RIF1Q5UIP0 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 FAM32BP-201ENST00000344033 333 ntBASIC5.29□□□□□ -1.56
RIF1Q5UIP0 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 RPL5P25-201ENST00000441148 775 ntBASIC5.29□□□□□ -1.56
RIF1Q5UIP0 AC112187.1-201ENST00000455837 479 ntBASIC5.29□□□□□ -1.56
RIF1Q5UIP0 RN7SL352P-201ENST00000466002 277 ntBASIC5.29□□□□□ -1.56
RIF1Q5UIP0 DUTP1-201ENST00000493631 470 ntBASIC5.29□□□□□ -1.56
RIF1Q5UIP0 SAP18P1-201ENST00000512058 390 ntBASIC5.29□□□□□ -1.56
RIF1Q5UIP0 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 MED28P5-201ENST00000528254 438 ntBASIC5.29□□□□□ -1.56
RIF1Q5UIP0 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
RIF1Q5UIP0 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC5.28□□□□□ -1.56
RIF1Q5UIP0 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RIF1Q5UIP0 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RIF1Q5UIP0 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RIF1Q5UIP0 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RIF1Q5UIP0 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.28□□□□□ -1.56
RIF1Q5UIP0 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RIF1Q5UIP0 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.28□□□□□ -1.56
RIF1Q5UIP0 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RIF1Q5UIP0 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RIF1Q5UIP0 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
RIF1Q5UIP0 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.28□□□□□ -1.56
RIF1Q5UIP0 CHEK2P3-201ENST00000416118 248 ntBASIC5.28□□□□□ -1.56
RIF1Q5UIP0 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.28□□□□□ -1.56
RIF1Q5UIP0 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.28□□□□□ -1.56
RIF1Q5UIP0 BZW1P1-201ENST00000454901 1240 ntBASIC5.28□□□□□ -1.56
RIF1Q5UIP0 RPL7L1P8-201ENST00000469911 741 ntBASIC5.28□□□□□ -1.56
RIF1Q5UIP0 GAPDHP56-201ENST00000506031 988 ntBASIC5.28□□□□□ -1.56
RIF1Q5UIP0 AC021483.2-201ENST00000567415 758 ntBASIC5.28□□□□□ -1.56
RIF1Q5UIP0 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.28□□□□□ -1.56
RIF1Q5UIP0 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.28□□□□□ -1.56
RIF1Q5UIP0 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RIF1Q5UIP0 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RIF1Q5UIP0 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC5.28□□□□□ -1.56
RIF1Q5UIP0 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RIF1Q5UIP0 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
RIF1Q5UIP0 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RIF1Q5UIP0 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC5.28□□□□□ -1.56
RIF1Q5UIP0 MTCO1P15-201ENST00000529569 1526 ntBASIC5.28□□□□□ -1.56
RIF1Q5UIP0 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
RIF1Q5UIP0 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
RIF1Q5UIP0 AC009237.10-201ENST00000414112 510 ntBASIC5.28□□□□□ -1.56
RIF1Q5UIP0 AC009237.5-201ENST00000414271 501 ntBASIC5.28□□□□□ -1.56
RIF1Q5UIP0 AC069213.2-201ENST00000420238 366 ntBASIC5.28□□□□□ -1.56
RIF1Q5UIP0 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.28□□□□□ -1.56
RIF1Q5UIP0 CENPIP1-201ENST00000425713 902 ntBASIC5.28□□□□□ -1.56
RIF1Q5UIP0 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.28□□□□□ -1.56
RIF1Q5UIP0 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.28□□□□□ -1.56
RIF1Q5UIP0 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.28□□□□□ -1.56
RIF1Q5UIP0 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms