Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.09□□□□□ -1.59
RFX4Q33E94 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.09□□□□□ -1.59
RFX4Q33E94 RNA5SP500-201ENST00000364486 119 ntBASIC5.09□□□□□ -1.59
RFX4Q33E94 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.09□□□□□ -1.59
RFX4Q33E94 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.09□□□□□ -1.59
RFX4Q33E94 AC211486.3-201ENST00000412694 621 ntBASIC5.09□□□□□ -1.59
RFX4Q33E94 AC090018.1-201ENST00000434369 367 ntBASIC5.09□□□□□ -1.59
RFX4Q33E94 GTF3AP5-201ENST00000442645 697 ntBASIC5.09□□□□□ -1.59
RFX4Q33E94 AC118758.1-202ENST00000454719 225 ntBASIC5.09□□□□□ -1.59
RFX4Q33E94 AC104339.1-201ENST00000465478 348 ntBASIC5.09□□□□□ -1.59
RFX4Q33E94 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.09□□□□□ -1.59
RFX4Q33E94 RPL32P33-201ENST00000487023 394 ntBASIC5.09□□□□□ -1.59
RFX4Q33E94 AC009120.1-201ENST00000493458 473 ntBASIC5.09□□□□□ -1.59
RFX4Q33E94 AL117692.1-201ENST00000494283 713 ntBASIC5.09□□□□□ -1.59
RFX4Q33E94 AC122718.2-201ENST00000505325 591 ntBASIC5.09□□□□□ -1.59
RFX4Q33E94 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.09□□□□□ -1.59
RFX4Q33E94 SCARNA20.4-201ENST00000516969 131 ntBASIC5.09□□□□□ -1.59
RFX4Q33E94 AC100784.1-201ENST00000522790 310 ntBASIC5.09□□□□□ -1.59
RFX4Q33E94 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.09□□□□□ -1.59
RFX4Q33E94 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RFX4Q33E94 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.09□□□□□ -1.59
RFX4Q33E94 LINC00556-201ENST00000569603 412 ntBASIC5.09□□□□□ -1.59
RFX4Q33E94 AC002310.3-201ENST00000569728 723 ntBASIC5.09□□□□□ -1.59
RFX4Q33E94 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.09□□□□□ -1.59
RFX4Q33E94 FAM27E4-201ENST00000605259 342 ntBASIC5.09□□□□□ -1.59
RFX4Q33E94 AL359091.2-201ENST00000609303 556 ntBASIC5.09□□□□□ -1.59
RFX4Q33E94 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.59
RFX4Q33E94 AC244100.4-201ENST00000617747 388 ntBASIC5.09□□□□□ -1.59
RFX4Q33E94 AL683826.1-201ENST00000624104 627 ntBASIC5.09□□□□□ -1.59
RFX4Q33E94 AC022919.1-201ENST00000624979 626 ntBASIC5.09□□□□□ -1.59
RFX4Q33E94 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.09□□□□□ -1.59
RFX4Q33E94 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RFX4Q33E94 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
RFX4Q33E94 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
RFX4Q33E94 AC025574.1-201ENST00000554784 1653 ntBASIC5.08□□□□□ -1.6
RFX4Q33E94 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
RFX4Q33E94 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFX4Q33E94 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFX4Q33E94 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RFX4Q33E94 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
RFX4Q33E94 THAP12P5-201ENST00000405864 2275 ntBASIC5.08□□□□□ -1.6
RFX4Q33E94 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RFX4Q33E94 GAPDHP24-201ENST00000328713 983 ntBASIC5.08□□□□□ -1.6
RFX4Q33E94 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.08□□□□□ -1.6
RFX4Q33E94 RPL12P9-201ENST00000412942 488 ntBASIC5.08□□□□□ -1.6
RFX4Q33E94 CBX1P3-201ENST00000413296 527 ntBASIC5.08□□□□□ -1.6
RFX4Q33E94 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.08□□□□□ -1.6
RFX4Q33E94 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RFX4Q33E94 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.08□□□□□ -1.6
RFX4Q33E94 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.08□□□□□ -1.6
RFX4Q33E94 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.08□□□□□ -1.6
RFX4Q33E94 AC068228.1-201ENST00000461723 211 ntBASIC5.08□□□□□ -1.6
RFX4Q33E94 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.08□□□□□ -1.6
RFX4Q33E94 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFX4Q33E94 RN7SL273P-201ENST00000481561 299 ntBASIC5.08□□□□□ -1.6
RFX4Q33E94 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.08□□□□□ -1.6
RFX4Q33E94 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFX4Q33E94 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.08□□□□□ -1.6
RFX4Q33E94 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.08□□□□□ -1.6
RFX4Q33E94 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.08□□□□□ -1.6
RFX4Q33E94 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.08□□□□□ -1.6
RFX4Q33E94 AC068993.1-201ENST00000546724 589 ntBASIC5.08□□□□□ -1.6
RFX4Q33E94 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.08□□□□□ -1.6
RFX4Q33E94 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.08□□□□□ -1.6
RFX4Q33E94 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.08□□□□□ -1.6
RFX4Q33E94 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.08□□□□□ -1.6
RFX4Q33E94 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.08□□□□□ -1.6
RFX4Q33E94 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.08□□□□□ -1.6
RFX4Q33E94 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.08□□□□□ -1.6
RFX4Q33E94 MIR6889-201ENST00000613185 59 ntBASIC5.08□□□□□ -1.6
RFX4Q33E94 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
RFX4Q33E94 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
RFX4Q33E94 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RFX4Q33E94 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
RFX4Q33E94 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
RFX4Q33E94 AL353796.1-201ENST00000561542 3241 ntBASIC5.08□□□□□ -1.6
RFX4Q33E94 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFX4Q33E94 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFX4Q33E94 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.08□□□□□ -1.6
RFX4Q33E94 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.07□□□□□ -1.6
RFX4Q33E94 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RFX4Q33E94 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.07□□□□□ -1.6
RFX4Q33E94 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RFX4Q33E94 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
RFX4Q33E94 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.07□□□□□ -1.6
RFX4Q33E94 RN7SKP74-201ENST00000362849 309 ntBASIC5.07□□□□□ -1.6
RFX4Q33E94 RNU1-19P-201ENST00000363306 165 ntBASIC5.07□□□□□ -1.6
RFX4Q33E94 RNA5SP30-201ENST00000365552 115 ntBASIC5.07□□□□□ -1.6
RFX4Q33E94 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RFX4Q33E94 RPS6P23-201ENST00000413224 722 ntBASIC5.07□□□□□ -1.6
RFX4Q33E94 NENFP1-201ENST00000419476 466 ntBASIC5.07□□□□□ -1.6
RFX4Q33E94 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.07□□□□□ -1.6
RFX4Q33E94 AC007161.1-204ENST00000423039 460 ntBASIC5.07□□□□□ -1.6
RFX4Q33E94 BX119321.1-201ENST00000428912 797 ntBASIC5.07□□□□□ -1.6
RFX4Q33E94 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.07□□□□□ -1.6
RFX4Q33E94 YRDCP3-201ENST00000456507 480 ntBASIC5.07□□□□□ -1.6
RFX4Q33E94 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.07□□□□□ -1.6
RFX4Q33E94 EIF4E2P2-201ENST00000492033 736 ntBASIC5.07□□□□□ -1.6
RFX4Q33E94 LSM3P4-201ENST00000502948 309 ntBASIC5.07□□□□□ -1.6
RFX4Q33E94 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms