Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC5.37□□□□□ -1.55
LTBQ06643 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.37□□□□□ -1.55
LTBQ06643 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.37□□□□□ -1.55
LTBQ06643 AP005119.1-201ENST00000580956 292 ntBASIC5.37□□□□□ -1.55
LTBQ06643 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.37□□□□□ -1.55
LTBQ06643 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
LTBQ06643 RN7SL787P-201ENST00000613000 284 ntBASIC5.37□□□□□ -1.55
LTBQ06643 AC118658.2-201ENST00000618697 459 ntBASIC5.37□□□□□ -1.55
LTBQ06643 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
LTBQ06643 AC087516.1-201ENST00000561236 2428 ntBASIC5.37□□□□□ -1.55
LTBQ06643 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
LTBQ06643 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LTBQ06643 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
LTBQ06643 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LTBQ06643 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LTBQ06643 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LTBQ06643 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LTBQ06643 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LTBQ06643 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LTBQ06643 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
LTBQ06643 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LTBQ06643 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.36□□□□□ -1.55
LTBQ06643 GNL2P1-201ENST00000451274 2190 ntBASIC5.36□□□□□ -1.55
LTBQ06643 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
LTBQ06643 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.36□□□□□ -1.55
LTBQ06643 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LTBQ06643 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.36□□□□□ -1.55
LTBQ06643 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.36□□□□□ -1.55
LTBQ06643 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
LTBQ06643 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
LTBQ06643 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.36□□□□□ -1.55
LTBQ06643 OR52B3P-201ENST00000314715 928 ntBASIC5.36□□□□□ -1.55
LTBQ06643 RNU1-19P-201ENST00000363306 165 ntBASIC5.36□□□□□ -1.55
LTBQ06643 RNU6-670P-201ENST00000364312 104 ntBASIC5.36□□□□□ -1.55
LTBQ06643 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
LTBQ06643 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LTBQ06643 SNRPEP6-201ENST00000407465 277 ntBASIC5.36□□□□□ -1.55
LTBQ06643 STAT4-203ENST00000409995 709 ntTSL 5 BASIC5.36□□□□□ -1.55
LTBQ06643 RPS3AP25-201ENST00000411660 793 ntBASIC5.36□□□□□ -1.55
LTBQ06643 AL355433.1-201ENST00000422804 300 ntBASIC5.36□□□□□ -1.55
LTBQ06643 AL606490.8-201ENST00000441624 319 ntBASIC5.36□□□□□ -1.55
LTBQ06643 RPS7P3-201ENST00000443360 580 ntBASIC5.36□□□□□ -1.55
LTBQ06643 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.36□□□□□ -1.55
LTBQ06643 AL445466.1-201ENST00000448432 357 ntBASIC5.36□□□□□ -1.55
LTBQ06643 YWHAEP1-201ENST00000453697 763 ntBASIC5.36□□□□□ -1.55
LTBQ06643 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC5.36□□□□□ -1.55
LTBQ06643 AL603882.1-201ENST00000463059 681 ntBASIC5.36□□□□□ -1.55
LTBQ06643 RPSAP37-201ENST00000470913 821 ntBASIC5.36□□□□□ -1.55
LTBQ06643 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.36□□□□□ -1.55
LTBQ06643 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.36□□□□□ -1.55
LTBQ06643 RNU6-760P-201ENST00000516078 97 ntBASIC5.36□□□□□ -1.55
LTBQ06643 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.36□□□□□ -1.55
LTBQ06643 AC078899.1-201ENST00000521432 1185 ntBASIC5.36□□□□□ -1.55
LTBQ06643 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.36□□□□□ -1.55
LTBQ06643 CIR1P1-201ENST00000524055 1133 ntBASIC5.36□□□□□ -1.55
LTBQ06643 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.36□□□□□ -1.55
LTBQ06643 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.36□□□□□ -1.55
LTBQ06643 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.36□□□□□ -1.55
LTBQ06643 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.36□□□□□ -1.55
LTBQ06643 AC007956.1-201ENST00000555623 542 ntBASIC5.36□□□□□ -1.55
LTBQ06643 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.36□□□□□ -1.55
LTBQ06643 AP001357.1-201ENST00000586304 1053 ntBASIC5.36□□□□□ -1.55
LTBQ06643 BNIP3P38-201ENST00000601117 544 ntBASIC5.36□□□□□ -1.55
LTBQ06643 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.36□□□□□ -1.55
LTBQ06643 AP005431.1-201ENST00000618479 319 ntBASIC5.36□□□□□ -1.55
LTBQ06643 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.36□□□□□ -1.55
LTBQ06643 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.36□□□□□ -1.55
LTBQ06643 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.36□□□□□ -1.55
LTBQ06643 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LTBQ06643 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LTBQ06643 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.36□□□□□ -1.55
LTBQ06643 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
LTBQ06643 WDR95P-201ENST00000425638 1542 ntBASIC5.36□□□□□ -1.55
LTBQ06643 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
LTBQ06643 AC008627.1-201ENST00000517511 1704 ntBASIC5.36□□□□□ -1.55
LTBQ06643 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
LTBQ06643 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
LTBQ06643 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
LTBQ06643 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LTBQ06643 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LTBQ06643 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LTBQ06643 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LTBQ06643 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
LTBQ06643 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
LTBQ06643 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LTBQ06643 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LTBQ06643 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LTBQ06643 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LTBQ06643 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.35□□□□□ -1.55
LTBQ06643 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
LTBQ06643 AC015689.2-201ENST00000528172 1738 ntBASIC5.35□□□□□ -1.55
LTBQ06643 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LTBQ06643 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.35□□□□□ -1.55
LTBQ06643 Z83820.1-201ENST00000456978 1499 ntBASIC5.35□□□□□ -1.55
LTBQ06643 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LTBQ06643 AC027279.1-201ENST00000568885 4284 ntBASIC5.35□□□□□ -1.55
LTBQ06643 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LTBQ06643 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.35□□□□□ -1.55
LTBQ06643 RNA5SP477-201ENST00000362639 119 ntBASIC5.35□□□□□ -1.55
LTBQ06643 RN7SKP162-201ENST00000363605 345 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms