Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.17□□□□□ -1.42
GFRA1P56159 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.17□□□□□ -1.42
GFRA1P56159 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC6.17□□□□□ -1.42
GFRA1P56159 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.17□□□□□ -1.42
GFRA1P56159 HMGB3P13-201ENST00000511263 607 ntBASIC6.17□□□□□ -1.42
GFRA1P56159 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.17□□□□□ -1.42
GFRA1P56159 AC113191.1-201ENST00000517759 403 ntBASIC6.17□□□□□ -1.42
GFRA1P56159 AP006587.5-201ENST00000532033 739 ntBASIC6.17□□□□□ -1.42
GFRA1P56159 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC6.17□□□□□ -1.42
GFRA1P56159 CHEK2P2-201ENST00000554701 672 ntBASIC6.17□□□□□ -1.42
GFRA1P56159 FXNP1-201ENST00000555153 337 ntBASIC6.17□□□□□ -1.42
GFRA1P56159 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC6.17□□□□□ -1.42
GFRA1P56159 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC6.17□□□□□ -1.42
GFRA1P56159 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.17□□□□□ -1.42
GFRA1P56159 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC6.17□□□□□ -1.42
GFRA1P56159 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.17□□□□□ -1.42
GFRA1P56159 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC6.17□□□□□ -1.42
GFRA1P56159 AC087575.1-201ENST00000585087 229 ntBASIC6.17□□□□□ -1.42
GFRA1P56159 AC022146.1-201ENST00000595307 847 ntBASIC6.17□□□□□ -1.42
GFRA1P56159 AL589765.6-201ENST00000601909 549 ntBASIC6.17□□□□□ -1.42
GFRA1P56159 AL390838.2-201ENST00000602394 274 ntBASIC6.17□□□□□ -1.42
GFRA1P56159 AP003465.2-201ENST00000602571 373 ntBASIC6.17□□□□□ -1.42
GFRA1P56159 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
GFRA1P56159 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.17□□□□□ -1.42
GFRA1P56159 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.17□□□□□ -1.42
GFRA1P56159 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
GFRA1P56159 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.17□□□□□ -1.42
GFRA1P56159 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC6.17□□□□□ -1.42
GFRA1P56159 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.17□□□□□ -1.42
GFRA1P56159 MFSD8-217ENST00000641178 4374 ntBASIC6.17□□□□□ -1.42
GFRA1P56159 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
GFRA1P56159 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
GFRA1P56159 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
GFRA1P56159 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
GFRA1P56159 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
GFRA1P56159 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
GFRA1P56159 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC6.17□□□□□ -1.42
GFRA1P56159 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC6.17□□□□□ -1.42
GFRA1P56159 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
GFRA1P56159 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
GFRA1P56159 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
GFRA1P56159 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
GFRA1P56159 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
GFRA1P56159 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
GFRA1P56159 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
GFRA1P56159 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
GFRA1P56159 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
GFRA1P56159 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
GFRA1P56159 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC6.16□□□□□ -1.42
GFRA1P56159 AC034111.1-201ENST00000562143 3770 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
GFRA1P56159 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
GFRA1P56159 CTAGE11P-201ENST00000451540 2353 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
GFRA1P56159 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
GFRA1P56159 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
GFRA1P56159 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
GFRA1P56159 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.16□□□□□ -1.42
GFRA1P56159 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
GFRA1P56159 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
GFRA1P56159 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.16□□□□□ -1.42
GFRA1P56159 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
GFRA1P56159 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
GFRA1P56159 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
GFRA1P56159 RPL12P13-201ENST00000310055 497 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
GFRA1P56159 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
GFRA1P56159 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
GFRA1P56159 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
GFRA1P56159 AC026310.1-201ENST00000396004 378 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.16□□□□□ -1.42
GFRA1P56159 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
GFRA1P56159 MIR1303-201ENST00000408625 86 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 RN7SKP271-201ENST00000410528 320 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.16□□□□□ -1.42
GFRA1P56159 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC6.16□□□□□ -1.42
GFRA1P56159 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 AC234781.4-201ENST00000419384 244 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 OFD1P2Y-201ENST00000421895 1149 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
GFRA1P56159 CENPIP1-201ENST00000425713 902 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 AL009174.1-201ENST00000426577 416 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 RPL21P110-201ENST00000433345 446 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 PPIAP17-201ENST00000438507 471 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 AC234771.4-201ENST00000441416 730 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.16□□□□□ -1.42
GFRA1P56159 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.16□□□□□ -1.42
GFRA1P56159 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC6.16□□□□□ -1.42
GFRA1P56159 AL137845.2-201ENST00000444292 988 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 COX6CP2-201ENST00000444980 225 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.16□□□□□ -1.42
GFRA1P56159 AC002486.2-201ENST00000447806 590 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 AL121578.2-201ENST00000448797 447 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 RBMY2TP-201ENST00000451162 947 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 AC022080.2-201ENST00000452932 533 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 NPM1P9-201ENST00000453156 844 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
GFRA1P56159 AC115223.1-201ENST00000466377 870 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 RN7SL216P-201ENST00000471607 298 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms