Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 NPM1P45-201ENST00000583151 559 ntBASIC5.38□□□□□ -1.55
RORAP35398 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.38□□□□□ -1.55
RORAP35398 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.38□□□□□ -1.55
RORAP35398 AC090607.5-201ENST00000615692 224 ntBASIC5.38□□□□□ -1.55
RORAP35398 AL589935.2-201ENST00000616471 1231 ntBASIC5.38□□□□□ -1.55
RORAP35398 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
RORAP35398 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RORAP35398 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RORAP35398 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.38□□□□□ -1.55
RORAP35398 KYNUP3-201ENST00000574386 1341 ntBASIC5.38□□□□□ -1.55
RORAP35398 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
RORAP35398 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.38□□□□□ -1.55
RORAP35398 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
RORAP35398 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
RORAP35398 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RORAP35398 AC093909.5-201ENST00000621839 1799 ntBASIC5.37□□□□□ -1.55
RORAP35398 NAMPTP1-201ENST00000440465 2514 ntBASIC5.37□□□□□ -1.55
RORAP35398 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
RORAP35398 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RORAP35398 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.37□□□□□ -1.55
RORAP35398 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.37□□□□□ -1.55
RORAP35398 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RORAP35398 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.37□□□□□ -1.55
RORAP35398 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.37□□□□□ -1.55
RORAP35398 MIR1178-201ENST00000408396 91 ntBASIC5.37□□□□□ -1.55
RORAP35398 RN7SKP279-201ENST00000411383 298 ntBASIC5.37□□□□□ -1.55
RORAP35398 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RORAP35398 AC092651.1-201ENST00000426110 312 ntBASIC5.37□□□□□ -1.55
RORAP35398 USP24P1-201ENST00000433802 779 ntBASIC5.37□□□□□ -1.55
RORAP35398 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.37□□□□□ -1.55
RORAP35398 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RORAP35398 AC007386.1-201ENST00000455212 582 ntBASIC5.37□□□□□ -1.55
RORAP35398 AC011225.1-201ENST00000457751 369 ntBASIC5.37□□□□□ -1.55
RORAP35398 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.37□□□□□ -1.55
RORAP35398 RPL35AP19-201ENST00000469425 329 ntBASIC5.37□□□□□ -1.55
RORAP35398 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RORAP35398 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RORAP35398 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.37□□□□□ -1.55
RORAP35398 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.37□□□□□ -1.55
RORAP35398 AC008126.1-201ENST00000549019 480 ntBASIC5.37□□□□□ -1.55
RORAP35398 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RORAP35398 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.37□□□□□ -1.55
RORAP35398 OR7E18P-201ENST00000592589 702 ntBASIC5.37□□□□□ -1.55
RORAP35398 IMMP1LP3-201ENST00000604197 224 ntBASIC5.37□□□□□ -1.55
RORAP35398 SUMO2P15-201ENST00000604285 278 ntBASIC5.37□□□□□ -1.55
RORAP35398 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.37□□□□□ -1.55
RORAP35398 PPATP2-201ENST00000605635 508 ntBASIC5.37□□□□□ -1.55
RORAP35398 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.37□□□□□ -1.55
RORAP35398 AL451049.1-201ENST00000608672 497 ntBASIC5.37□□□□□ -1.55
RORAP35398 AL035661.1-201ENST00000620459 1144 ntBASIC5.37□□□□□ -1.55
RORAP35398 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.37□□□□□ -1.55
RORAP35398 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RORAP35398 AL031595.2-201ENST00000624215 19071 ntBASIC5.37□□□□□ -1.55
RORAP35398 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.37□□□□□ -1.55
RORAP35398 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RORAP35398 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.37□□□□□ -1.55
RORAP35398 CASC19-248ENST00000641674 1356 ntBASIC5.37□□□□□ -1.55
RORAP35398 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RORAP35398 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RORAP35398 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.37□□□□□ -1.55
RORAP35398 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RORAP35398 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RORAP35398 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
RORAP35398 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.37□□□□□ -1.55
RORAP35398 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
RORAP35398 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
RORAP35398 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RORAP35398 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
RORAP35398 TET1P1-201ENST00000426627 2301 ntBASIC5.36□□□□□ -1.55
RORAP35398 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RORAP35398 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
RORAP35398 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.36□□□□□ -1.55
RORAP35398 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RORAP35398 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
RORAP35398 RNA5SP234-201ENST00000363916 119 ntBASIC5.36□□□□□ -1.55
RORAP35398 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.36□□□□□ -1.55
RORAP35398 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.36□□□□□ -1.55
RORAP35398 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.36□□□□□ -1.55
RORAP35398 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.36□□□□□ -1.55
RORAP35398 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.36□□□□□ -1.55
RORAP35398 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.36□□□□□ -1.55
RORAP35398 RPL12P18-201ENST00000437175 325 ntBASIC5.36□□□□□ -1.55
RORAP35398 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.36□□□□□ -1.55
RORAP35398 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.36□□□□□ -1.55
RORAP35398 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.36□□□□□ -1.55
RORAP35398 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.36□□□□□ -1.55
RORAP35398 RANP1-206ENST00000455094 651 ntBASIC5.36□□□□□ -1.55
RORAP35398 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.36□□□□□ -1.55
RORAP35398 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.36□□□□□ -1.55
RORAP35398 AC114982.2-201ENST00000461396 358 ntBASIC5.36□□□□□ -1.55
RORAP35398 RPS23P2-201ENST00000463671 415 ntBASIC5.36□□□□□ -1.55
RORAP35398 COPS8P2-201ENST00000473228 627 ntBASIC5.36□□□□□ -1.55
RORAP35398 EIF1P7-201ENST00000487533 337 ntBASIC5.36□□□□□ -1.55
RORAP35398 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.36□□□□□ -1.55
RORAP35398 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.36□□□□□ -1.55
RORAP35398 BX510359.5-201ENST00000515651 304 ntBASIC5.36□□□□□ -1.55
RORAP35398 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.36□□□□□ -1.55
RORAP35398 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.36□□□□□ -1.55
RORAP35398 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.36□□□□□ -1.55
RORAP35398 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms