Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 HMGN2P36-201ENST00000529541 409 ntBASIC3.9□□□□□ -1.79
CKS2P33552 PSMC1P8-201ENST00000536820 1296 ntBASIC3.9□□□□□ -1.79
CKS2P33552 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC3.9□□□□□ -1.79
CKS2P33552 HSPE1P2-201ENST00000554777 306 ntBASIC3.9□□□□□ -1.79
CKS2P33552 RPA2P1-201ENST00000556557 721 ntBASIC3.9□□□□□ -1.79
CKS2P33552 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC3.9□□□□□ -1.79
CKS2P33552 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC3.9□□□□□ -1.79
CKS2P33552 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC3.9□□□□□ -1.79
CKS2P33552 WBP1LP11-201ENST00000586141 328 ntBASIC3.9□□□□□ -1.79
CKS2P33552 AC090236.2-201ENST00000587933 1101 ntBASIC3.9□□□□□ -1.79
CKS2P33552 AP000769.2-201ENST00000602344 396 ntBASIC3.9□□□□□ -1.79
CKS2P33552 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC3.9□□□□□ -1.79
CKS2P33552 AC015819.1-201ENST00000613588 663 ntBASIC3.9□□□□□ -1.79
CKS2P33552 AC024884.1-201ENST00000620583 399 ntBASIC3.9□□□□□ -1.79
CKS2P33552 AL390318.1-201ENST00000624564 687 ntBASIC3.9□□□□□ -1.79
CKS2P33552 AC073869.10-201ENST00000642016 354 ntBASIC3.9□□□□□ -1.79
CKS2P33552 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC3.9□□□□□ -1.79
CKS2P33552 HSPD1P9-201ENST00000420325 1636 ntBASIC3.9□□□□□ -1.79
CKS2P33552 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
CKS2P33552 TET1P1-201ENST00000426627 2301 ntBASIC3.9□□□□□ -1.79
CKS2P33552 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC3.9□□□□□ -1.79
CKS2P33552 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CKS2P33552 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CKS2P33552 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC3.9□□□□□ -1.79
CKS2P33552 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CKS2P33552 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
CKS2P33552 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC3.9□□□□□ -1.79
CKS2P33552 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
CKS2P33552 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
CKS2P33552 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CKS2P33552 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CKS2P33552 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.9□□□□□ -1.79
CKS2P33552 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC3.9□□□□□ -1.79
CKS2P33552 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC3.89□□□□□ -1.79
CKS2P33552 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CKS2P33552 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CKS2P33552 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CKS2P33552 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CKS2P33552 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CKS2P33552 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CKS2P33552 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CKS2P33552 Y_RNA.209-201ENST00000364156 111 ntBASIC3.89□□□□□ -1.79
CKS2P33552 MIR551A-201ENST00000385042 96 ntBASIC3.89□□□□□ -1.79
CKS2P33552 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CKS2P33552 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CKS2P33552 RN7SKP146-201ENST00000410242 334 ntBASIC3.89□□□□□ -1.79
CKS2P33552 RN7SKP125-201ENST00000410481 302 ntBASIC3.89□□□□□ -1.79
CKS2P33552 RN7SKP97-201ENST00000410966 333 ntBASIC3.89□□□□□ -1.79
CKS2P33552 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC3.89□□□□□ -1.79
CKS2P33552 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC3.89□□□□□ -1.79
CKS2P33552 AC013429.2-201ENST00000418798 781 ntBASIC3.89□□□□□ -1.79
CKS2P33552 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CKS2P33552 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC3.89□□□□□ -1.79
CKS2P33552 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CKS2P33552 RPL35AP21-201ENST00000437667 333 ntBASIC3.89□□□□□ -1.79
CKS2P33552 AC006335.2-201ENST00000437993 330 ntBASIC3.89□□□□□ -1.79
CKS2P33552 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC3.89□□□□□ -1.79
CKS2P33552 AL031584.1-201ENST00000447169 754 ntBASIC3.89□□□□□ -1.79
CKS2P33552 RN7SL254P-201ENST00000460609 284 ntBASIC3.89□□□□□ -1.79
CKS2P33552 AC092754.1-201ENST00000472975 479 ntBASIC3.89□□□□□ -1.79
CKS2P33552 AC087672.1-201ENST00000479876 766 ntBASIC3.89□□□□□ -1.79
CKS2P33552 RN7SL346P-201ENST00000491561 294 ntBASIC3.89□□□□□ -1.79
CKS2P33552 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC3.89□□□□□ -1.79
CKS2P33552 HMGN1P16-201ENST00000508308 283 ntBASIC3.89□□□□□ -1.79
CKS2P33552 AC134698.1-201ENST00000511619 643 ntBASIC3.89□□□□□ -1.79
CKS2P33552 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC3.89□□□□□ -1.79
CKS2P33552 HMGN1P17-201ENST00000513734 295 ntBASIC3.89□□□□□ -1.79
CKS2P33552 RNA5SP303-201ENST00000516192 130 ntBASIC3.89□□□□□ -1.79
CKS2P33552 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC3.89□□□□□ -1.79
CKS2P33552 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC3.89□□□□□ -1.79
CKS2P33552 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC3.89□□□□□ -1.79
CKS2P33552 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC3.89□□□□□ -1.79
CKS2P33552 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC3.89□□□□□ -1.79
CKS2P33552 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC3.89□□□□□ -1.79
CKS2P33552 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC3.89□□□□□ -1.79
CKS2P33552 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC3.89□□□□□ -1.79
CKS2P33552 AC015674.1-201ENST00000578482 267 ntBASIC3.89□□□□□ -1.79
CKS2P33552 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC3.89□□□□□ -1.79
CKS2P33552 AC063977.5-201ENST00000601044 974 ntBASIC3.89□□□□□ -1.79
CKS2P33552 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC3.89□□□□□ -1.79
CKS2P33552 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC3.89□□□□□ -1.79
CKS2P33552 IGKV2OR2-7-201ENST00000604652 304 ntBASIC3.89□□□□□ -1.79
CKS2P33552 AL451049.1-201ENST00000608672 497 ntBASIC3.89□□□□□ -1.79
CKS2P33552 AL135999.3-201ENST00000610501 812 ntBASIC3.89□□□□□ -1.79
CKS2P33552 MIR6809-201ENST00000612189 116 ntBASIC3.89□□□□□ -1.79
CKS2P33552 AC004801.6-201ENST00000616571 978 ntBASIC3.89□□□□□ -1.79
CKS2P33552 AC015914.2-201ENST00000618167 288 ntBASIC3.89□□□□□ -1.79
CKS2P33552 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
CKS2P33552 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CKS2P33552 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
CKS2P33552 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC3.89□□□□□ -1.79
CKS2P33552 AC007342.5-201ENST00000571340 2142 ntBASIC3.89□□□□□ -1.79
CKS2P33552 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CKS2P33552 AL353796.1-201ENST00000561542 3241 ntBASIC3.89□□□□□ -1.79
CKS2P33552 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CKS2P33552 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
CKS2P33552 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC3.88□□□□□ -1.79
CKS2P33552 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CKS2P33552 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
CKS2P33552 MTND5P12-201ENST00000502851 1449 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms