Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
HOXC8P31273 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
HOXC8P31273 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
HOXC8P31273 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC8P31273 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC8P31273 RNA5SP326-201ENST00000363209 110 ntBASIC6.07□□□□□ -1.44
HOXC8P31273 RNA5SP514-201ENST00000363717 111 ntBASIC6.07□□□□□ -1.44
HOXC8P31273 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.07□□□□□ -1.44
HOXC8P31273 SNORA67-201ENST00000384423 137 ntBASIC6.07□□□□□ -1.44
HOXC8P31273 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HOXC8P31273 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXC8P31273 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXC8P31273 SETP9-201ENST00000423837 832 ntBASIC6.07□□□□□ -1.44
HOXC8P31273 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC8P31273 RPL12P39-201ENST00000455456 496 ntBASIC6.07□□□□□ -1.44
HOXC8P31273 ATP5LP5-201ENST00000483050 299 ntBASIC6.07□□□□□ -1.44
HOXC8P31273 PDCL3P4-201ENST00000489621 720 ntBASIC6.07□□□□□ -1.44
HOXC8P31273 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
HOXC8P31273 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXC8P31273 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXC8P31273 RNU6-941P-201ENST00000516346 108 ntBASIC6.07□□□□□ -1.44
HOXC8P31273 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXC8P31273 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
HOXC8P31273 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXC8P31273 AC137627.1-201ENST00000545761 289 ntBASIC6.07□□□□□ -1.44
HOXC8P31273 OR11J2P-201ENST00000555298 907 ntBASIC6.07□□□□□ -1.44
HOXC8P31273 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXC8P31273 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXC8P31273 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXC8P31273 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
HOXC8P31273 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXC8P31273 TAS2R6P-201ENST00000605022 826 ntBASIC6.07□□□□□ -1.44
HOXC8P31273 AL353729.2-201ENST00000605859 1249 ntBASIC6.07□□□□□ -1.44
HOXC8P31273 AC243960.7-201ENST00000623532 707 ntBASIC6.07□□□□□ -1.44
HOXC8P31273 CFTRP2-201ENST00000634304 199 ntBASIC6.07□□□□□ -1.44
HOXC8P31273 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.07□□□□□ -1.44
HOXC8P31273 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC8P31273 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC8P31273 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC8P31273 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXC8P31273 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
HOXC8P31273 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC8P31273 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
HOXC8P31273 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC8P31273 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.06□□□□□ -1.44
HOXC8P31273 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
HOXC8P31273 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC8P31273 OR55B1P-203ENST00000641518 2602 ntBASIC6.06□□□□□ -1.44
HOXC8P31273 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
HOXC8P31273 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
HOXC8P31273 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
HOXC8P31273 RPL23P2-201ENST00000320371 421 ntBASIC6.06□□□□□ -1.44
HOXC8P31273 RNU1-59P-201ENST00000364829 162 ntBASIC6.06□□□□□ -1.44
HOXC8P31273 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
HOXC8P31273 AL109941.1-201ENST00000401925 229 ntBASIC6.06□□□□□ -1.44
HOXC8P31273 AL133270.1-201ENST00000402635 279 ntBASIC6.06□□□□□ -1.44
HOXC8P31273 AL133388.1-201ENST00000404509 287 ntBASIC6.06□□□□□ -1.44
HOXC8P31273 AC096921.1-201ENST00000411661 375 ntBASIC6.06□□□□□ -1.44
HOXC8P31273 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC6.06□□□□□ -1.44
HOXC8P31273 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC8P31273 AC093655.2-201ENST00000425735 631 ntBASIC6.06□□□□□ -1.44
HOXC8P31273 AL672138.1-201ENST00000450604 1015 ntBASIC6.06□□□□□ -1.44
HOXC8P31273 OR6C72P-201ENST00000451403 892 ntBASIC6.06□□□□□ -1.44
HOXC8P31273 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.06□□□□□ -1.44
HOXC8P31273 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC8P31273 RN7SKP99-201ENST00000517028 307 ntBASIC6.06□□□□□ -1.44
HOXC8P31273 NPM1P52-201ENST00000518264 846 ntBASIC6.06□□□□□ -1.44
HOXC8P31273 AC022784.5-201ENST00000522241 437 ntBASIC6.06□□□□□ -1.44
HOXC8P31273 HMGB1P40-201ENST00000525121 540 ntBASIC6.06□□□□□ -1.44
HOXC8P31273 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
HOXC8P31273 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC6.06□□□□□ -1.44
HOXC8P31273 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.06□□□□□ -1.44
HOXC8P31273 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
HOXC8P31273 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
HOXC8P31273 MTATP6P25-201ENST00000574491 261 ntBASIC6.06□□□□□ -1.44
HOXC8P31273 H3F3BP2-201ENST00000583907 357 ntBASIC6.06□□□□□ -1.44
HOXC8P31273 AC069307.1-201ENST00000602820 447 ntBASIC6.06□□□□□ -1.44
HOXC8P31273 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.06□□□□□ -1.44
HOXC8P31273 U1.25-201ENST00000614085 162 ntBASIC6.06□□□□□ -1.44
HOXC8P31273 U1.34-201ENST00000618578 162 ntBASIC6.06□□□□□ -1.44
HOXC8P31273 U1.31-201ENST00000620022 160 ntBASIC6.06□□□□□ -1.44
HOXC8P31273 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC8P31273 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC8P31273 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC8P31273 AC009779.8-201ENST00000641684 4384 ntBASIC6.06□□□□□ -1.44
HOXC8P31273 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC8P31273 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC8P31273 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.06□□□□□ -1.44
HOXC8P31273 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.06□□□□□ -1.44
HOXC8P31273 AC092111.2-201ENST00000611627 1414 ntBASIC6.06□□□□□ -1.44
HOXC8P31273 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC8P31273 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
HOXC8P31273 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC8P31273 ZNF733P-202ENST00000444809 1573 ntBASIC6.06□□□□□ -1.44
HOXC8P31273 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.05□□□□□ -1.44
HOXC8P31273 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC8P31273 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.05□□□□□ -1.44
HOXC8P31273 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC8P31273 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC8P31273 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms