Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AC138907.8-201ENST00000623981 2256 ntBASIC6.25□□□□□ -1.41
HOXA13P31271 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
HOXA13P31271 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXA13P31271 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXA13P31271 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HOXA13P31271 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXA13P31271 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXA13P31271 AC005261.2-201ENST00000593427 4258 ntBASIC6.24□□□□□ -1.41
HOXA13P31271 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXA13P31271 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
HOXA13P31271 AC123769.1-201ENST00000530992 3192 ntBASIC6.24□□□□□ -1.41
HOXA13P31271 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXA13P31271 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXA13P31271 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.24□□□□□ -1.41
HOXA13P31271 RNA5SP339-201ENST00000390987 122 ntBASIC6.24□□□□□ -1.41
HOXA13P31271 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.24□□□□□ -1.41
HOXA13P31271 MTND4LP17-201ENST00000414607 293 ntBASIC6.24□□□□□ -1.41
HOXA13P31271 OR10T1P-201ENST00000424327 947 ntBASIC6.24□□□□□ -1.41
HOXA13P31271 NANOGP4-201ENST00000427230 913 ntBASIC6.24□□□□□ -1.41
HOXA13P31271 GSTM5P1-201ENST00000434751 660 ntBASIC6.24□□□□□ -1.41
HOXA13P31271 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.24□□□□□ -1.41
HOXA13P31271 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.24□□□□□ -1.41
HOXA13P31271 AZGP1P2-201ENST00000454506 345 ntBASIC6.24□□□□□ -1.41
HOXA13P31271 HMGN1P8-201ENST00000463578 288 ntBASIC6.24□□□□□ -1.41
HOXA13P31271 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC6.24□□□□□ -1.41
HOXA13P31271 HIGD1AP14-201ENST00000507617 282 ntBASIC6.24□□□□□ -1.41
HOXA13P31271 MTND6P2-201ENST00000512226 524 ntBASIC6.24□□□□□ -1.41
HOXA13P31271 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXA13P31271 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXA13P31271 AP004607.2-201ENST00000533949 322 ntBASIC6.24□□□□□ -1.41
HOXA13P31271 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
HOXA13P31271 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXA13P31271 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.24□□□□□ -1.41
HOXA13P31271 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.24□□□□□ -1.41
HOXA13P31271 OOSP1P2-201ENST00000579644 351 ntBASIC6.24□□□□□ -1.41
HOXA13P31271 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXA13P31271 AC109583.2-201ENST00000617367 129 ntBASIC6.24□□□□□ -1.41
HOXA13P31271 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.24□□□□□ -1.41
HOXA13P31271 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
HOXA13P31271 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXA13P31271 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXA13P31271 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXA13P31271 AL590763.1-201ENST00000398297 1545 ntBASIC6.24□□□□□ -1.41
HOXA13P31271 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
HOXA13P31271 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXA13P31271 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.24□□□□□ -1.41
HOXA13P31271 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.24□□□□□ -1.41
HOXA13P31271 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXA13P31271 AL078595.2-201ENST00000605309 1780 ntBASIC6.23□□□□□ -1.41
HOXA13P31271 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXA13P31271 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
HOXA13P31271 AL360270.2-201ENST00000562952 5985 ntBASIC6.23□□□□□ -1.41
HOXA13P31271 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXA13P31271 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.23□□□□□ -1.41
HOXA13P31271 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HOXA13P31271 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HOXA13P31271 RPS21P8-201ENST00000413365 247 ntBASIC6.23□□□□□ -1.41
HOXA13P31271 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC6.23□□□□□ -1.41
HOXA13P31271 DSTNP5-201ENST00000427921 523 ntBASIC6.23□□□□□ -1.41
HOXA13P31271 RPL34P27-201ENST00000428810 349 ntBASIC6.23□□□□□ -1.41
HOXA13P31271 OR6C72P-201ENST00000451403 892 ntBASIC6.23□□□□□ -1.41
HOXA13P31271 RN7SL30P-201ENST00000488416 306 ntBASIC6.23□□□□□ -1.41
HOXA13P31271 SCARNA16.4-201ENST00000516956 187 ntBASIC6.23□□□□□ -1.41
HOXA13P31271 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC6.23□□□□□ -1.41
HOXA13P31271 AL049779.2-201ENST00000553847 315 ntBASIC6.23□□□□□ -1.41
HOXA13P31271 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.23□□□□□ -1.41
HOXA13P31271 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HOXA13P31271 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXA13P31271 AL356752.1-201ENST00000615844 593 ntBASIC6.23□□□□□ -1.41
HOXA13P31271 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXA13P31271 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.23□□□□□ -1.41
HOXA13P31271 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HOXA13P31271 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXA13P31271 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
HOXA13P31271 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
HOXA13P31271 AC109780.1-201ENST00000451768 1344 ntBASIC6.23□□□□□ -1.41
HOXA13P31271 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HOXA13P31271 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HOXA13P31271 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
HOXA13P31271 THAP12P8-201ENST00000447914 2115 ntBASIC6.22□□□□□ -1.41
HOXA13P31271 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.22□□□□□ -1.41
HOXA13P31271 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
HOXA13P31271 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.22□□□□□ -1.41
HOXA13P31271 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.22□□□□□ -1.41
HOXA13P31271 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.22□□□□□ -1.41
HOXA13P31271 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HOXA13P31271 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.22□□□□□ -1.41
HOXA13P31271 U3.2-201ENST00000362981 210 ntBASIC6.22□□□□□ -1.41
HOXA13P31271 RNU6-891P-201ENST00000384280 111 ntBASIC6.22□□□□□ -1.41
HOXA13P31271 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
HOXA13P31271 RNU4-64P-201ENST00000410795 131 ntBASIC6.22□□□□□ -1.41
HOXA13P31271 MTND4LP21-201ENST00000415303 295 ntBASIC6.22□□□□□ -1.41
HOXA13P31271 SLC35E1P1-201ENST00000419313 864 ntBASIC6.22□□□□□ -1.41
HOXA13P31271 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.22□□□□□ -1.41
HOXA13P31271 AC245047.2-201ENST00000441060 530 ntBASIC6.22□□□□□ -1.41
HOXA13P31271 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.22□□□□□ -1.41
HOXA13P31271 RAD1P2-201ENST00000446414 663 ntBASIC6.22□□□□□ -1.41
HOXA13P31271 MYO5BP2-201ENST00000449815 1277 ntBASIC6.22□□□□□ -1.41
HOXA13P31271 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.22□□□□□ -1.41
HOXA13P31271 AL035090.1-201ENST00000454835 332 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms