Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A5P29400 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A5P29400 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC6.29□□□□□ -1.4
COL4A5P29400 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A5P29400 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
COL4A5P29400 RN7SKP114-201ENST00000410327 279 ntBASIC6.29□□□□□ -1.4
COL4A5P29400 OR10T1P-201ENST00000424327 947 ntBASIC6.29□□□□□ -1.4
COL4A5P29400 DNAJC19P7-201ENST00000428811 344 ntBASIC6.29□□□□□ -1.4
COL4A5P29400 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.29□□□□□ -1.4
COL4A5P29400 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC6.29□□□□□ -1.4
COL4A5P29400 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC6.29□□□□□ -1.4
COL4A5P29400 RBMY2TP-201ENST00000451162 947 ntBASIC6.29□□□□□ -1.4
COL4A5P29400 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.29□□□□□ -1.4
COL4A5P29400 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.29□□□□□ -1.4
COL4A5P29400 AC103987.1-201ENST00000473394 348 ntBASIC6.29□□□□□ -1.4
COL4A5P29400 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.29□□□□□ -1.4
COL4A5P29400 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.29□□□□□ -1.4
COL4A5P29400 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC6.29□□□□□ -1.4
COL4A5P29400 MORF4L1P3-201ENST00000525966 950 ntBASIC6.29□□□□□ -1.4
COL4A5P29400 AC008147.3-201ENST00000548666 354 ntBASIC6.29□□□□□ -1.4
COL4A5P29400 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A5P29400 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.29□□□□□ -1.4
COL4A5P29400 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.29□□□□□ -1.4
COL4A5P29400 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A5P29400 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A5P29400 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A5P29400 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC6.28□□□□□ -1.4
COL4A5P29400 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.28□□□□□ -1.4
COL4A5P29400 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
COL4A5P29400 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.28□□□□□ -1.4
COL4A5P29400 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A5P29400 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC6.28□□□□□ -1.4
COL4A5P29400 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A5P29400 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A5P29400 AC104162.1-201ENST00000430831 2382 ntBASIC6.28□□□□□ -1.4
COL4A5P29400 AC100757.1-201ENST00000616872 1835 ntBASIC6.28□□□□□ -1.4
COL4A5P29400 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC6.28□□□□□ -1.4
COL4A5P29400 OR52J1P-201ENST00000450596 932 ntBASIC6.28□□□□□ -1.4
COL4A5P29400 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC6.28□□□□□ -1.4
COL4A5P29400 NUTF2P7-201ENST00000453086 375 ntBASIC6.28□□□□□ -1.4
COL4A5P29400 AC068587.1-201ENST00000483613 781 ntBASIC6.28□□□□□ -1.4
COL4A5P29400 IGBP1P5-201ENST00000507524 1000 ntBASIC6.28□□□□□ -1.4
COL4A5P29400 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC6.28□□□□□ -1.4
COL4A5P29400 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.28□□□□□ -1.4
COL4A5P29400 OR4A17P-201ENST00000526032 904 ntBASIC6.28□□□□□ -1.4
COL4A5P29400 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC6.28□□□□□ -1.4
COL4A5P29400 AC011453.2-201ENST00000603737 729 ntBASIC6.28□□□□□ -1.4
COL4A5P29400 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.28□□□□□ -1.4
COL4A5P29400 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.28□□□□□ -1.4
COL4A5P29400 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A5P29400 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A5P29400 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A5P29400 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
COL4A5P29400 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
COL4A5P29400 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A5P29400 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC6.28□□□□□ -1.4
COL4A5P29400 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A5P29400 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A5P29400 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.28□□□□□ -1.4
COL4A5P29400 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A5P29400 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A5P29400 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.28□□□□□ -1.4
COL4A5P29400 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A5P29400 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
COL4A5P29400 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A5P29400 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
COL4A5P29400 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A5P29400 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A5P29400 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
COL4A5P29400 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A5P29400 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL4A5P29400 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL4A5P29400 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
COL4A5P29400 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.27□□□□□ -1.41
COL4A5P29400 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL4A5P29400 HSPA8P15-201ENST00000401676 786 ntBASIC6.27□□□□□ -1.41
COL4A5P29400 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.27□□□□□ -1.41
COL4A5P29400 AC092651.1-201ENST00000426110 312 ntBASIC6.27□□□□□ -1.41
COL4A5P29400 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.27□□□□□ -1.41
COL4A5P29400 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.27□□□□□ -1.41
COL4A5P29400 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.27□□□□□ -1.41
COL4A5P29400 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.27□□□□□ -1.41
COL4A5P29400 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC6.27□□□□□ -1.41
COL4A5P29400 AC091912.1-201ENST00000511351 248 ntBASIC6.27□□□□□ -1.41
COL4A5P29400 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.27□□□□□ -1.41
COL4A5P29400 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC6.27□□□□□ -1.41
COL4A5P29400 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.27□□□□□ -1.41
COL4A5P29400 RN7SL690P-201ENST00000582087 240 ntBASIC6.27□□□□□ -1.41
COL4A5P29400 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.27□□□□□ -1.41
COL4A5P29400 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC6.27□□□□□ -1.41
COL4A5P29400 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC6.27□□□□□ -1.41
COL4A5P29400 AL359715.3-201ENST00000569267 2123 ntBASIC6.27□□□□□ -1.41
COL4A5P29400 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
COL4A5P29400 AC140479.2-201ENST00000421567 3130 ntBASIC6.27□□□□□ -1.41
COL4A5P29400 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.27□□□□□ -1.41
COL4A5P29400 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL4A5P29400 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC6.27□□□□□ -1.41
COL4A5P29400 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL4A5P29400 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL4A5P29400 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms