Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ABCD3P28288 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ABCD3P28288 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
ABCD3P28288 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ABCD3P28288 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.54□□□□□ -1.52
ABCD3P28288 AP002512.4-202ENST00000641599 4530 ntBASIC5.54□□□□□ -1.52
ABCD3P28288 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
ABCD3P28288 GTF2IP4-201ENST00000453092 2054 ntBASIC5.54□□□□□ -1.52
ABCD3P28288 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.54□□□□□ -1.52
ABCD3P28288 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
ABCD3P28288 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
ABCD3P28288 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.53□□□□□ -1.52
ABCD3P28288 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
ABCD3P28288 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.53□□□□□ -1.52
ABCD3P28288 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ABCD3P28288 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
ABCD3P28288 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ABCD3P28288 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
ABCD3P28288 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ABCD3P28288 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ABCD3P28288 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ABCD3P28288 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ABCD3P28288 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
ABCD3P28288 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ABCD3P28288 SNORA63.3-201ENST00000362682 132 ntBASIC5.53□□□□□ -1.52
ABCD3P28288 RNU6-252P-201ENST00000363232 107 ntBASIC5.53□□□□□ -1.52
ABCD3P28288 RN7SKP186-201ENST00000365371 303 ntBASIC5.53□□□□□ -1.52
ABCD3P28288 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.53□□□□□ -1.52
ABCD3P28288 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.53□□□□□ -1.52
ABCD3P28288 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ABCD3P28288 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
ABCD3P28288 AL096711.1-201ENST00000404780 554 ntBASIC5.53□□□□□ -1.52
ABCD3P28288 RN7SKP240-201ENST00000410583 375 ntBASIC5.53□□□□□ -1.52
ABCD3P28288 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.53□□□□□ -1.52
ABCD3P28288 XKRYP4-201ENST00000414395 483 ntBASIC5.53□□□□□ -1.52
ABCD3P28288 RPL35AP3-201ENST00000414680 288 ntBASIC5.53□□□□□ -1.52
ABCD3P28288 NIFKP3-201ENST00000417799 865 ntBASIC5.53□□□□□ -1.52
ABCD3P28288 OR51A6P-201ENST00000418680 1004 ntBASIC5.53□□□□□ -1.52
ABCD3P28288 AC115283.1-201ENST00000427353 400 ntBASIC5.53□□□□□ -1.52
ABCD3P28288 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.53□□□□□ -1.52
ABCD3P28288 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.53□□□□□ -1.52
ABCD3P28288 RPS27P5-201ENST00000444247 244 ntBASIC5.53□□□□□ -1.52
ABCD3P28288 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
ABCD3P28288 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ABCD3P28288 XKRYP5-201ENST00000449659 483 ntBASIC5.53□□□□□ -1.52
ABCD3P28288 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC5.53□□□□□ -1.52
ABCD3P28288 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.53□□□□□ -1.52
ABCD3P28288 CST12P-201ENST00000457644 362 ntBASIC5.53□□□□□ -1.52
ABCD3P28288 AC104164.1-201ENST00000460282 590 ntBASIC5.53□□□□□ -1.52
ABCD3P28288 RN7SL269P-201ENST00000467795 305 ntBASIC5.53□□□□□ -1.52
ABCD3P28288 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.53□□□□□ -1.52
ABCD3P28288 AL035690.1-201ENST00000490892 383 ntBASIC5.53□□□□□ -1.52
ABCD3P28288 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.53□□□□□ -1.52
ABCD3P28288 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.53□□□□□ -1.52
ABCD3P28288 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.53□□□□□ -1.52
ABCD3P28288 RNU6-1004P-201ENST00000516584 111 ntBASIC5.53□□□□□ -1.52
ABCD3P28288 AC008429.4-201ENST00000521201 182 ntBASIC5.53□□□□□ -1.52
ABCD3P28288 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.53□□□□□ -1.52
ABCD3P28288 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ABCD3P28288 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.53□□□□□ -1.52
ABCD3P28288 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.53□□□□□ -1.52
ABCD3P28288 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.53□□□□□ -1.52
ABCD3P28288 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.53□□□□□ -1.52
ABCD3P28288 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.53□□□□□ -1.52
ABCD3P28288 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.53□□□□□ -1.52
ABCD3P28288 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.53□□□□□ -1.52
ABCD3P28288 CD24P2-201ENST00000565486 219 ntBASIC5.53□□□□□ -1.52
ABCD3P28288 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.53□□□□□ -1.52
ABCD3P28288 AC090826.1-203ENST00000569235 490 ntBASIC5.53□□□□□ -1.52
ABCD3P28288 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.53□□□□□ -1.52
ABCD3P28288 AC027216.1-201ENST00000577726 685 ntBASIC5.53□□□□□ -1.52
ABCD3P28288 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
ABCD3P28288 AC005244.1-201ENST00000582566 339 ntBASIC5.53□□□□□ -1.52
ABCD3P28288 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.53□□□□□ -1.52
ABCD3P28288 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.53□□□□□ -1.52
ABCD3P28288 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.53□□□□□ -1.52
ABCD3P28288 AC125494.2-201ENST00000602431 657 ntBASIC5.53□□□□□ -1.52
ABCD3P28288 AC079315.1-201ENST00000602952 623 ntBASIC5.53□□□□□ -1.52
ABCD3P28288 AC108673.3-201ENST00000609183 335 ntBASIC5.53□□□□□ -1.52
ABCD3P28288 uc_338.26-201ENST00000612659 160 ntBASIC5.53□□□□□ -1.52
ABCD3P28288 MIR8084-201ENST00000614105 89 ntBASIC5.53□□□□□ -1.52
ABCD3P28288 AC006840.1-201ENST00000623069 542 ntBASIC5.53□□□□□ -1.52
ABCD3P28288 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
ABCD3P28288 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.53□□□□□ -1.52
ABCD3P28288 AC099654.6-201ENST00000636487 512 ntBASIC5.53□□□□□ -1.52
ABCD3P28288 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ABCD3P28288 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ABCD3P28288 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ABCD3P28288 AC007996.1-201ENST00000620414 2821 ntBASIC5.53□□□□□ -1.52
ABCD3P28288 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.53□□□□□ -1.52
ABCD3P28288 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
ABCD3P28288 AC005725.1-201ENST00000577346 2607 ntBASIC5.53□□□□□ -1.52
ABCD3P28288 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.53□□□□□ -1.52
ABCD3P28288 AC087516.1-201ENST00000561236 2428 ntBASIC5.53□□□□□ -1.52
ABCD3P28288 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ABCD3P28288 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ABCD3P28288 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.52□□□□□ -1.53
ABCD3P28288 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
ABCD3P28288 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ABCD3P28288 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms