Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.55□□□□□ -1.52
HMGA1P17096 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.55□□□□□ -1.52
HMGA1P17096 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HMGA1P17096 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGA1P17096 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.54□□□□□ -1.52
HMGA1P17096 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGA1P17096 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMGA1P17096 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HMGA1P17096 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGA1P17096 AC092747.4-201ENST00000620519 1861 ntBASIC5.54□□□□□ -1.52
HMGA1P17096 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGA1P17096 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGA1P17096 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGA1P17096 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMGA1P17096 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGA1P17096 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HMGA1P17096 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.54□□□□□ -1.52
HMGA1P17096 AL589647.1-201ENST00000402485 466 ntBASIC5.54□□□□□ -1.52
HMGA1P17096 NUDT19P3-201ENST00000404698 555 ntBASIC5.54□□□□□ -1.52
HMGA1P17096 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.54□□□□□ -1.52
HMGA1P17096 AC211486.3-201ENST00000412694 621 ntBASIC5.54□□□□□ -1.52
HMGA1P17096 EI24P4-201ENST00000423683 1078 ntBASIC5.54□□□□□ -1.52
HMGA1P17096 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.54□□□□□ -1.52
HMGA1P17096 VN1R54P-201ENST00000435210 1049 ntBASIC5.54□□□□□ -1.52
HMGA1P17096 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.54□□□□□ -1.52
HMGA1P17096 PSAT1P4-201ENST00000466500 526 ntBASIC5.54□□□□□ -1.52
HMGA1P17096 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMGA1P17096 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.54□□□□□ -1.52
HMGA1P17096 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.54□□□□□ -1.52
HMGA1P17096 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.54□□□□□ -1.52
HMGA1P17096 AC079064.1-201ENST00000528365 362 ntBASIC5.54□□□□□ -1.52
HMGA1P17096 OR4A43P-201ENST00000532938 908 ntBASIC5.54□□□□□ -1.52
HMGA1P17096 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.54□□□□□ -1.52
HMGA1P17096 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.54□□□□□ -1.52
HMGA1P17096 MTCO1P1-201ENST00000624263 1081 ntBASIC5.54□□□□□ -1.52
HMGA1P17096 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.54□□□□□ -1.52
HMGA1P17096 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.54□□□□□ -1.52
HMGA1P17096 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.54□□□□□ -1.52
HMGA1P17096 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGA1P17096 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.54□□□□□ -1.52
HMGA1P17096 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGA1P17096 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.54□□□□□ -1.52
HMGA1P17096 AC004076.2-201ENST00000620532 3323 ntBASIC5.54□□□□□ -1.52
HMGA1P17096 EPS15P1-202ENST00000459691 2071 ntBASIC5.54□□□□□ -1.52
HMGA1P17096 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGA1P17096 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HMGA1P17096 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HMGA1P17096 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
HMGA1P17096 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMGA1P17096 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMGA1P17096 AC003973.3-201ENST00000624863 2822 ntBASIC5.53□□□□□ -1.52
HMGA1P17096 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.53□□□□□ -1.52
HMGA1P17096 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.53□□□□□ -1.52
HMGA1P17096 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGA1P17096 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGA1P17096 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.53□□□□□ -1.52
HMGA1P17096 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HMGA1P17096 U3.28-201ENST00000391249 210 ntBASIC5.53□□□□□ -1.52
HMGA1P17096 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMGA1P17096 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.53□□□□□ -1.52
HMGA1P17096 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HMGA1P17096 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.53□□□□□ -1.52
HMGA1P17096 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HMGA1P17096 RPS4XP16-201ENST00000427198 791 ntBASIC5.53□□□□□ -1.52
HMGA1P17096 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.53□□□□□ -1.52
HMGA1P17096 RPL7P61-201ENST00000451721 751 ntBASIC5.53□□□□□ -1.52
HMGA1P17096 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.53□□□□□ -1.52
HMGA1P17096 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.53□□□□□ -1.52
HMGA1P17096 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.53□□□□□ -1.52
HMGA1P17096 RN7SKP66-201ENST00000516681 231 ntBASIC5.53□□□□□ -1.52
HMGA1P17096 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.53□□□□□ -1.52
HMGA1P17096 MIR4646-201ENST00000580775 63 ntBASIC5.53□□□□□ -1.52
HMGA1P17096 AC009027.1-201ENST00000604510 479 ntBASIC5.53□□□□□ -1.52
HMGA1P17096 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMGA1P17096 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.53□□□□□ -1.52
HMGA1P17096 uc_338.7-201ENST00000621834 124 ntBASIC5.53□□□□□ -1.52
HMGA1P17096 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGA1P17096 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGA1P17096 AC073429.2-201ENST00000569694 1444 ntBASIC5.53□□□□□ -1.52
HMGA1P17096 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC5.53□□□□□ -1.52
HMGA1P17096 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMGA1P17096 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGA1P17096 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGA1P17096 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMGA1P17096 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGA1P17096 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMGA1P17096 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
HMGA1P17096 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMGA1P17096 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
HMGA1P17096 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HMGA1P17096 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HMGA1P17096 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.52□□□□□ -1.53
HMGA1P17096 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.52□□□□□ -1.53
HMGA1P17096 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGA1P17096 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HMGA1P17096 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGA1P17096 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HMGA1P17096 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.52□□□□□ -1.53
HMGA1P17096 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.52□□□□□ -1.53
HMGA1P17096 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms