Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 FKBP1AP1-201ENST00000594588 318 ntBASIC4.42□□□□□ -1.7
CCL3L1P16619 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC4.42□□□□□ -1.7
CCL3L1P16619 AP000864.1-201ENST00000609424 650 ntBASIC4.42□□□□□ -1.7
CCL3L1P16619 AC109583.2-201ENST00000617367 129 ntBASIC4.42□□□□□ -1.7
CCL3L1P16619 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCL3L1P16619 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.42□□□□□ -1.7
CCL3L1P16619 AC099654.6-201ENST00000636487 512 ntBASIC4.42□□□□□ -1.7
CCL3L1P16619 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCL3L1P16619 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCL3L1P16619 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCL3L1P16619 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCL3L1P16619 CASC19-260ENST00000641828 2001 ntBASIC4.42□□□□□ -1.7
CCL3L1P16619 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC4.42□□□□□ -1.7
CCL3L1P16619 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCL3L1P16619 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCL3L1P16619 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.42□□□□□ -1.7
CCL3L1P16619 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCL3L1P16619 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCL3L1P16619 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCL3L1P16619 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCL3L1P16619 AC140134.1-201ENST00000511830 3544 ntBASIC4.42□□□□□ -1.7
CCL3L1P16619 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCL3L1P16619 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCL3L1P16619 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCL3L1P16619 MTCO1P11-201ENST00000429111 1528 ntBASIC4.41□□□□□ -1.7
CCL3L1P16619 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCL3L1P16619 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCL3L1P16619 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.41□□□□□ -1.7
CCL3L1P16619 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
CCL3L1P16619 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
CCL3L1P16619 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
CCL3L1P16619 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.41□□□□□ -1.7
CCL3L1P16619 RN7SKP162-201ENST00000363605 345 ntBASIC4.41□□□□□ -1.7
CCL3L1P16619 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCL3L1P16619 MIR105-1-201ENST00000385222 81 ntBASIC4.41□□□□□ -1.7
CCL3L1P16619 RNA5SP339-201ENST00000390987 122 ntBASIC4.41□□□□□ -1.7
CCL3L1P16619 AC092642.1-201ENST00000392417 425 ntBASIC4.41□□□□□ -1.7
CCL3L1P16619 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.41□□□□□ -1.7
CCL3L1P16619 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.41□□□□□ -1.7
CCL3L1P16619 FAM96AP1-201ENST00000430879 482 ntBASIC4.41□□□□□ -1.7
CCL3L1P16619 RPL7L1P9-201ENST00000431298 745 ntBASIC4.41□□□□□ -1.7
CCL3L1P16619 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCL3L1P16619 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.41□□□□□ -1.7
CCL3L1P16619 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.41□□□□□ -1.7
CCL3L1P16619 GAPDHP25-201ENST00000447061 1001 ntBASIC4.41□□□□□ -1.7
CCL3L1P16619 AC104634.1-201ENST00000452720 462 ntBASIC4.41□□□□□ -1.7
CCL3L1P16619 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.41□□□□□ -1.7
CCL3L1P16619 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.41□□□□□ -1.7
CCL3L1P16619 AC093827.1-201ENST00000480094 861 ntBASIC4.41□□□□□ -1.7
CCL3L1P16619 RPS4XP1-201ENST00000482189 787 ntBASIC4.41□□□□□ -1.7
CCL3L1P16619 AC058823.1-201ENST00000485315 474 ntBASIC4.41□□□□□ -1.7
CCL3L1P16619 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.41□□□□□ -1.7
CCL3L1P16619 RNU6-941P-201ENST00000516346 108 ntBASIC4.41□□□□□ -1.7
CCL3L1P16619 IGKV2-18-201ENST00000522607 343 ntBASIC4.41□□□□□ -1.7
CCL3L1P16619 AC126177.5-201ENST00000549599 178 ntBASIC4.41□□□□□ -1.7
CCL3L1P16619 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.41□□□□□ -1.7
CCL3L1P16619 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.41□□□□□ -1.7
CCL3L1P16619 AC109309.2-201ENST00000612597 332 ntBASIC4.41□□□□□ -1.7
CCL3L1P16619 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CCL3L1P16619 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.41□□□□□ -1.7
CCL3L1P16619 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCL3L1P16619 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CCL3L1P16619 AC112198.2-201ENST00000426589 6996 ntBASIC4.41□□□□□ -1.7
CCL3L1P16619 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.41□□□□□ -1.7
CCL3L1P16619 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CCL3L1P16619 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC4.41□□□□□ -1.7
CCL3L1P16619 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCL3L1P16619 MELK-211ENST00000545008 2236 ntTSL 2 BASIC4.41□□□□□ -1.7
CCL3L1P16619 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CCL3L1P16619 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CCL3L1P16619 YES1-203ENST00000577961 4554 ntTSL 5 BASIC4.4□□□□□ -1.7
CCL3L1P16619 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.7
CCL3L1P16619 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CCL3L1P16619 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CCL3L1P16619 EIF3EP2-201ENST00000423042 1814 ntBASIC4.4□□□□□ -1.7
CCL3L1P16619 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CCL3L1P16619 SNORA51.1-201ENST00000363243 140 ntBASIC4.4□□□□□ -1.71
CCL3L1P16619 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC4.4□□□□□ -1.71
CCL3L1P16619 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CCL3L1P16619 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.4□□□□□ -1.71
CCL3L1P16619 RNU1-149P-201ENST00000390870 161 ntBASIC4.4□□□□□ -1.71
CCL3L1P16619 AL391361.1-201ENST00000405580 489 ntBASIC4.4□□□□□ -1.71
CCL3L1P16619 RNA5SP487-201ENST00000410186 122 ntBASIC4.4□□□□□ -1.71
CCL3L1P16619 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.4□□□□□ -1.71
CCL3L1P16619 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.4□□□□□ -1.71
CCL3L1P16619 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.4□□□□□ -1.71
CCL3L1P16619 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC4.4□□□□□ -1.71
CCL3L1P16619 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCL3L1P16619 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCL3L1P16619 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.4□□□□□ -1.71
CCL3L1P16619 RN7SL423P-201ENST00000486202 304 ntBASIC4.4□□□□□ -1.71
CCL3L1P16619 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
CCL3L1P16619 CDC42P3-201ENST00000518493 633 ntBASIC4.4□□□□□ -1.71
CCL3L1P16619 MIR4489-201ENST00000578869 62 ntBASIC4.4□□□□□ -1.71
CCL3L1P16619 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.4□□□□□ -1.71
CCL3L1P16619 MIR7853-201ENST00000584820 132 ntBASIC4.4□□□□□ -1.71
CCL3L1P16619 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.4□□□□□ -1.71
CCL3L1P16619 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.4□□□□□ -1.71
CCL3L1P16619 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCL3L1P16619 CYP4F35P-202ENST00000636121 390 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms