Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
TOP2AP11388 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
TOP2AP11388 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC9.16□□□□□ -0.94
TOP2AP11388 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TOP2AP11388 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC9.16□□□□□ -0.94
TOP2AP11388 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC9.16□□□□□ -0.94
TOP2AP11388 U3.28-201ENST00000391249 210 ntBASIC9.16□□□□□ -0.94
TOP2AP11388 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC9.16□□□□□ -0.94
TOP2AP11388 TPT1P13-201ENST00000449760 499 ntBASIC9.16□□□□□ -0.94
TOP2AP11388 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC9.16□□□□□ -0.94
TOP2AP11388 GLUD1P3-202ENST00000508551 200 ntBASIC9.16□□□□□ -0.94
TOP2AP11388 RAB9BP1-201ENST00000519581 626 ntBASIC9.16□□□□□ -0.94
TOP2AP11388 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC9.16□□□□□ -0.94
TOP2AP11388 OR4A17P-201ENST00000526032 904 ntBASIC9.16□□□□□ -0.94
TOP2AP11388 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC9.16□□□□□ -0.94
TOP2AP11388 BGLT3-201ENST00000564523 994 ntBASIC9.16□□□□□ -0.94
TOP2AP11388 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC9.16□□□□□ -0.94
TOP2AP11388 AC011487.3-201ENST00000593607 453 ntBASIC9.16□□□□□ -0.94
TOP2AP11388 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
TOP2AP11388 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TOP2AP11388 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC9.16□□□□□ -0.94
TOP2AP11388 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
TOP2AP11388 AC063976.2-201ENST00000425667 3556 ntBASIC9.16□□□□□ -0.94
TOP2AP11388 SDAD1P1-202ENST00000524156 2051 ntBASIC9.16□□□□□ -0.94
TOP2AP11388 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC9.16□□□□□ -0.94
TOP2AP11388 TTC3P1-201ENST00000399586 6081 ntBASIC9.16□□□□□ -0.94
TOP2AP11388 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC9.16□□□□□ -0.94
TOP2AP11388 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC9.16□□□□□ -0.94
TOP2AP11388 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TOP2AP11388 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
TOP2AP11388 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TOP2AP11388 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC9.16□□□□□ -0.94
TOP2AP11388 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
TOP2AP11388 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
TOP2AP11388 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC9.15□□□□□ -0.94
TOP2AP11388 RN7SKP114-201ENST00000410327 279 ntBASIC9.15□□□□□ -0.94
TOP2AP11388 OR7E125P-201ENST00000443450 846 ntBASIC9.15□□□□□ -0.94
TOP2AP11388 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC9.15□□□□□ -0.94
TOP2AP11388 AC012400.1-201ENST00000518452 381 ntBASIC9.15□□□□□ -0.94
TOP2AP11388 IGKV1-32-201ENST00000519290 311 ntBASIC9.15□□□□□ -0.94
TOP2AP11388 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC9.15□□□□□ -0.94
TOP2AP11388 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC9.15□□□□□ -0.94
TOP2AP11388 AL391358.1-201ENST00000605342 190 ntBASIC9.15□□□□□ -0.94
TOP2AP11388 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC9.15□□□□□ -0.94
TOP2AP11388 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC9.15□□□□□ -0.94
TOP2AP11388 STK3-216ENST00000523601 3107 ntTSL 2 BASIC9.15□□□□□ -0.94
TOP2AP11388 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC9.15□□□□□ -0.94
TOP2AP11388 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
TOP2AP11388 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC9.15□□□□□ -0.94
TOP2AP11388 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
TOP2AP11388 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
TOP2AP11388 MAX-203ENST00000341653 330 ntTSL 2 BASIC9.15□□□□□ -0.95
TOP2AP11388 HSPA8P15-201ENST00000401676 786 ntBASIC9.15□□□□□ -0.95
TOP2AP11388 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.95
TOP2AP11388 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC9.15□□□□□ -0.95
TOP2AP11388 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC9.15□□□□□ -0.95
TOP2AP11388 AC091390.1-201ENST00000433904 331 ntBASIC9.15□□□□□ -0.95
TOP2AP11388 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.95
TOP2AP11388 AC063943.1-201ENST00000465434 453 ntBASIC9.15□□□□□ -0.95
TOP2AP11388 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
TOP2AP11388 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
TOP2AP11388 OR5AN2P-201ENST00000534535 896 ntBASIC9.15□□□□□ -0.95
TOP2AP11388 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
TOP2AP11388 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
TOP2AP11388 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
TOP2AP11388 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TOP2AP11388 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC9.14□□□□□ -0.95
TOP2AP11388 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC9.14□□□□□ -0.95
TOP2AP11388 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TOP2AP11388 AC007559.1-201ENST00000428736 355 ntBASIC9.14□□□□□ -0.95
TOP2AP11388 DAP3-209ENST00000465375 729 ntTSL 2 BASIC9.14□□□□□ -0.95
TOP2AP11388 RPL7P40-201ENST00000481703 745 ntBASIC9.14□□□□□ -0.95
TOP2AP11388 PRELID3BP5-201ENST00000508612 460 ntBASIC9.14□□□□□ -0.95
TOP2AP11388 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
TOP2AP11388 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC9.14□□□□□ -0.95
TOP2AP11388 AC105254.2-201ENST00000603636 436 ntBASIC9.14□□□□□ -0.95
TOP2AP11388 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
TOP2AP11388 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TOP2AP11388 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
TOP2AP11388 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC9.14□□□□□ -0.95
TOP2AP11388 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC9.14□□□□□ -0.95
TOP2AP11388 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
TOP2AP11388 DMD-222ENST00000474231 5209 ntTSL 5 BASIC9.14□□□□□ -0.95
TOP2AP11388 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
TOP2AP11388 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
TOP2AP11388 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
TOP2AP11388 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC9.13□□□□□ -0.95
TOP2AP11388 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TOP2AP11388 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TOP2AP11388 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TOP2AP11388 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
TOP2AP11388 AL117378.2-201ENST00000622916 1337 ntBASIC9.13□□□□□ -0.95
TOP2AP11388 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC9.13□□□□□ -0.95
TOP2AP11388 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC9.13□□□□□ -0.95
TOP2AP11388 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC9.13□□□□□ -0.95
TOP2AP11388 U3.10-201ENST00000364459 214 ntBASIC9.13□□□□□ -0.95
TOP2AP11388 AC016712.1-201ENST00000431088 378 ntBASIC9.13□□□□□ -0.95
TOP2AP11388 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC9.13□□□□□ -0.95
TOP2AP11388 GSTA7P-201ENST00000438425 448 ntBASIC9.13□□□□□ -0.95
TOP2AP11388 AC112498.1-201ENST00000444401 332 ntBASIC9.13□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms