Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HIST1H2ABP04908 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HIST1H2ABP04908 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.29□□□□□ -1.56
HIST1H2ABP04908 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
HIST1H2ABP04908 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
HIST1H2ABP04908 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HIST1H2ABP04908 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HIST1H2ABP04908 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HIST1H2ABP04908 RNU6-650P-201ENST00000365658 111 ntBASIC5.29□□□□□ -1.56
HIST1H2ABP04908 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
HIST1H2ABP04908 AC016739.1-201ENST00000405359 345 ntBASIC5.29□□□□□ -1.56
HIST1H2ABP04908 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.29□□□□□ -1.56
HIST1H2ABP04908 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.29□□□□□ -1.56
HIST1H2ABP04908 AC019205.1-201ENST00000421830 730 ntBASIC5.29□□□□□ -1.56
HIST1H2ABP04908 MTND4LP13-201ENST00000425022 298 ntBASIC5.29□□□□□ -1.56
HIST1H2ABP04908 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.29□□□□□ -1.56
HIST1H2ABP04908 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.29□□□□□ -1.56
HIST1H2ABP04908 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.29□□□□□ -1.56
HIST1H2ABP04908 AC093716.1-201ENST00000435923 377 ntBASIC5.29□□□□□ -1.56
HIST1H2ABP04908 ATP5LP2-201ENST00000440646 311 ntBASIC5.29□□□□□ -1.56
HIST1H2ABP04908 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.29□□□□□ -1.56
HIST1H2ABP04908 FRG2FP-204ENST00000453982 852 ntBASIC5.29□□□□□ -1.56
HIST1H2ABP04908 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.29□□□□□ -1.56
HIST1H2ABP04908 AC006539.1-201ENST00000481419 501 ntBASIC5.29□□□□□ -1.56
HIST1H2ABP04908 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.29□□□□□ -1.56
HIST1H2ABP04908 PDCL3P4-201ENST00000489621 720 ntBASIC5.29□□□□□ -1.56
HIST1H2ABP04908 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HIST1H2ABP04908 MTND3P3-201ENST00000505004 126 ntBASIC5.29□□□□□ -1.56
HIST1H2ABP04908 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.29□□□□□ -1.56
HIST1H2ABP04908 AC091874.2-201ENST00000505889 720 ntBASIC5.29□□□□□ -1.56
HIST1H2ABP04908 VTA1P2-201ENST00000520205 911 ntBASIC5.29□□□□□ -1.56
HIST1H2ABP04908 AC109635.6-201ENST00000525487 1113 ntBASIC5.29□□□□□ -1.56
HIST1H2ABP04908 AC004923.2-201ENST00000529649 369 ntBASIC5.29□□□□□ -1.56
HIST1H2ABP04908 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
HIST1H2ABP04908 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.29□□□□□ -1.56
HIST1H2ABP04908 RPA2P1-201ENST00000556557 721 ntBASIC5.29□□□□□ -1.56
HIST1H2ABP04908 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HIST1H2ABP04908 MIR5010-201ENST00000582846 120 ntBASIC5.29□□□□□ -1.56
HIST1H2ABP04908 AC090236.2-201ENST00000587933 1101 ntBASIC5.29□□□□□ -1.56
HIST1H2ABP04908 AC068768.2-201ENST00000602352 343 ntBASIC5.29□□□□□ -1.56
HIST1H2ABP04908 AC002069.2-201ENST00000603580 883 ntBASIC5.29□□□□□ -1.56
HIST1H2ABP04908 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.29□□□□□ -1.56
HIST1H2ABP04908 AC092266.1-201ENST00000610958 165 ntBASIC5.29□□□□□ -1.56
HIST1H2ABP04908 MIR1264-201ENST00000616374 69 ntBASIC5.29□□□□□ -1.56
HIST1H2ABP04908 AL645927.2-201ENST00000618350 349 ntBASIC5.29□□□□□ -1.56
HIST1H2ABP04908 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.29□□□□□ -1.56
HIST1H2ABP04908 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.29□□□□□ -1.56
HIST1H2ABP04908 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.29□□□□□ -1.56
HIST1H2ABP04908 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HIST1H2ABP04908 AL022322.2-201ENST00000624072 20397 ntBASIC5.29□□□□□ -1.56
HIST1H2ABP04908 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HIST1H2ABP04908 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
HIST1H2ABP04908 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HIST1H2ABP04908 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HIST1H2ABP04908 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
HIST1H2ABP04908 AC117409.1-201ENST00000470499 1310 ntBASIC5.28□□□□□ -1.56
HIST1H2ABP04908 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.28□□□□□ -1.56
HIST1H2ABP04908 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HIST1H2ABP04908 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HIST1H2ABP04908 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
HIST1H2ABP04908 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HIST1H2ABP04908 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.28□□□□□ -1.56
HIST1H2ABP04908 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.28□□□□□ -1.56
HIST1H2ABP04908 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.28□□□□□ -1.56
HIST1H2ABP04908 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.28□□□□□ -1.56
HIST1H2ABP04908 PTP4A1P3-201ENST00000433661 420 ntBASIC5.28□□□□□ -1.56
HIST1H2ABP04908 SUMO2P1-206ENST00000445436 284 ntBASIC5.28□□□□□ -1.56
HIST1H2ABP04908 AC073476.1-201ENST00000452854 407 ntBASIC5.28□□□□□ -1.56
HIST1H2ABP04908 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.28□□□□□ -1.56
HIST1H2ABP04908 AC023194.2-201ENST00000465398 406 ntBASIC5.28□□□□□ -1.56
HIST1H2ABP04908 RN7SL269P-201ENST00000467795 305 ntBASIC5.28□□□□□ -1.56
HIST1H2ABP04908 AC091544.1-201ENST00000484702 348 ntBASIC5.28□□□□□ -1.56
HIST1H2ABP04908 NPM1P28-201ENST00000492269 840 ntBASIC5.28□□□□□ -1.56
HIST1H2ABP04908 RPL23AP73-201ENST00000492507 471 ntBASIC5.28□□□□□ -1.56
HIST1H2ABP04908 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.28□□□□□ -1.56
HIST1H2ABP04908 AC122718.2-201ENST00000505325 591 ntBASIC5.28□□□□□ -1.56
HIST1H2ABP04908 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.28□□□□□ -1.56
HIST1H2ABP04908 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.28□□□□□ -1.56
HIST1H2ABP04908 MTCYBP19-201ENST00000517463 1124 ntBASIC5.28□□□□□ -1.56
HIST1H2ABP04908 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.28□□□□□ -1.56
HIST1H2ABP04908 OSBPL9P3-201ENST00000534523 595 ntBASIC5.28□□□□□ -1.56
HIST1H2ABP04908 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.28□□□□□ -1.56
HIST1H2ABP04908 AL845552.1-201ENST00000556820 323 ntBASIC5.28□□□□□ -1.56
HIST1H2ABP04908 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.28□□□□□ -1.56
HIST1H2ABP04908 AC106785.3-201ENST00000564064 847 ntBASIC5.28□□□□□ -1.56
HIST1H2ABP04908 AP005119.1-201ENST00000580956 292 ntBASIC5.28□□□□□ -1.56
HIST1H2ABP04908 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HIST1H2ABP04908 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.28□□□□□ -1.56
HIST1H2ABP04908 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.28□□□□□ -1.56
HIST1H2ABP04908 AC124916.2-201ENST00000604416 224 ntBASIC5.28□□□□□ -1.56
HIST1H2ABP04908 AC015849.2-201ENST00000605738 409 ntBASIC5.28□□□□□ -1.56
HIST1H2ABP04908 AL136131.3-201ENST00000607600 188 ntBASIC5.28□□□□□ -1.56
HIST1H2ABP04908 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.28□□□□□ -1.56
HIST1H2ABP04908 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.28□□□□□ -1.56
HIST1H2ABP04908 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HIST1H2ABP04908 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
HIST1H2ABP04908 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
HIST1H2ABP04908 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
HIST1H2ABP04908 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.28□□□□□ -1.56
HIST1H2ABP04908 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms