Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC6.97□□□□□ -1.29
PDGFAP04085 CHCHD2P7-201ENST00000508008 452 ntBASIC6.97□□□□□ -1.29
PDGFAP04085 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC6.97□□□□□ -1.29
PDGFAP04085 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC6.97□□□□□ -1.29
PDGFAP04085 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC6.97□□□□□ -1.29
PDGFAP04085 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC6.97□□□□□ -1.29
PDGFAP04085 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC6.97□□□□□ -1.29
PDGFAP04085 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.97□□□□□ -1.29
PDGFAP04085 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.97□□□□□ -1.29
PDGFAP04085 IGLVIV-59-201ENST00000520218 250 ntBASIC6.97□□□□□ -1.29
PDGFAP04085 RGS5-218ENST00000526176 574 ntTSL 4 BASIC6.97□□□□□ -1.29
PDGFAP04085 PHBP2-201ENST00000532859 806 ntBASIC6.97□□□□□ -1.29
PDGFAP04085 OR6C73P-201ENST00000546432 358 ntBASIC6.97□□□□□ -1.29
PDGFAP04085 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.97□□□□□ -1.29
PDGFAP04085 AC138915.2-201ENST00000569776 97 ntBASIC6.97□□□□□ -1.29
PDGFAP04085 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC6.97□□□□□ -1.29
PDGFAP04085 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC6.97□□□□□ -1.29
PDGFAP04085 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC6.97□□□□□ -1.29
PDGFAP04085 SNX29P2-204ENST00000603801 875 ntBASIC6.97□□□□□ -1.29
PDGFAP04085 AP001330.5-201ENST00000607176 411 ntBASIC6.97□□□□□ -1.29
PDGFAP04085 AC098614.4-201ENST00000607601 462 ntBASIC6.97□□□□□ -1.29
PDGFAP04085 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
PDGFAP04085 AC145207.9-201ENST00000623802 325 ntBASIC6.97□□□□□ -1.29
PDGFAP04085 AC129908.1-201ENST00000624553 648 ntBASIC6.97□□□□□ -1.29
PDGFAP04085 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.97□□□□□ -1.29
PDGFAP04085 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
PDGFAP04085 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC6.97□□□□□ -1.29
PDGFAP04085 AL353052.2-201ENST00000441459 2241 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PDGFAP04085 OR52B5P-204ENST00000641744 3467 ntBASIC6.97□□□□□ -1.29
PDGFAP04085 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PDGFAP04085 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
PDGFAP04085 SF3A3P1-201ENST00000446317 1477 ntBASIC6.97□□□□□ -1.29
PDGFAP04085 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
PDGFAP04085 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PDGFAP04085 LINC02128-205ENST00000641755 1334 ntBASIC6.97□□□□□ -1.29
PDGFAP04085 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
PDGFAP04085 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.97□□□□□ -1.29
PDGFAP04085 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
PDGFAP04085 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.97□□□□□ -1.29
PDGFAP04085 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PDGFAP04085 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC6.96□□□□□ -1.29
PDGFAP04085 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.96□□□□□ -1.29
PDGFAP04085 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
PDGFAP04085 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC6.96□□□□□ -1.29
PDGFAP04085 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
PDGFAP04085 SPATA31C2-201ENST00000324915 3777 ntBASIC6.96□□□□□ -1.29
PDGFAP04085 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
PDGFAP04085 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC6.96□□□□□ -1.29
PDGFAP04085 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.96□□□□□ -1.29
PDGFAP04085 LRRC31-204ENST00000523069 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
PDGFAP04085 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
PDGFAP04085 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC6.96□□□□□ -1.29
PDGFAP04085 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
PDGFAP04085 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
PDGFAP04085 AL391380.1-201ENST00000439300 1432 ntBASIC6.96□□□□□ -1.3
PDGFAP04085 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
PDGFAP04085 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.96□□□□□ -1.3
PDGFAP04085 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
PDGFAP04085 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
PDGFAP04085 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
PDGFAP04085 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
PDGFAP04085 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
PDGFAP04085 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
PDGFAP04085 SSX9-201ENST00000376909 591 ntBASIC6.96□□□□□ -1.3
PDGFAP04085 SUGT1P1-201ENST00000379514 476 ntBASIC6.96□□□□□ -1.3
PDGFAP04085 SNORA40.3-201ENST00000390964 122 ntBASIC6.96□□□□□ -1.3
PDGFAP04085 RPL23AP29-201ENST00000397284 453 ntBASIC6.96□□□□□ -1.3
PDGFAP04085 AL451061.1-201ENST00000407887 862 ntBASIC6.96□□□□□ -1.3
PDGFAP04085 RN7SKP285-201ENST00000410137 318 ntBASIC6.96□□□□□ -1.3
PDGFAP04085 MTCO1P17-201ENST00000411522 491 ntBASIC6.96□□□□□ -1.3
PDGFAP04085 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.96□□□□□ -1.3
PDGFAP04085 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.96□□□□□ -1.3
PDGFAP04085 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC6.96□□□□□ -1.3
PDGFAP04085 AL590682.1-201ENST00000437248 344 ntBASIC6.96□□□□□ -1.3
PDGFAP04085 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.96□□□□□ -1.3
PDGFAP04085 AC092427.1-201ENST00000439177 601 ntBASIC6.96□□□□□ -1.3
PDGFAP04085 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC6.96□□□□□ -1.3
PDGFAP04085 Z99127.3-201ENST00000448158 395 ntBASIC6.96□□□□□ -1.3
PDGFAP04085 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC6.96□□□□□ -1.3
PDGFAP04085 NPM1P9-201ENST00000453156 844 ntBASIC6.96□□□□□ -1.3
PDGFAP04085 AL033528.1-201ENST00000453780 140 ntBASIC6.96□□□□□ -1.3
PDGFAP04085 AC112206.1-201ENST00000468416 477 ntBASIC6.96□□□□□ -1.3
PDGFAP04085 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.96□□□□□ -1.3
PDGFAP04085 AC109462.1-201ENST00000491087 368 ntBASIC6.96□□□□□ -1.3
PDGFAP04085 AC008868.1-201ENST00000509786 737 ntBASIC6.96□□□□□ -1.3
PDGFAP04085 IGKV2D-10-201ENST00000520194 281 ntBASIC6.96□□□□□ -1.3
PDGFAP04085 SNX18P27-201ENST00000523611 779 ntBASIC6.96□□□□□ -1.3
PDGFAP04085 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC6.96□□□□□ -1.3
PDGFAP04085 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
PDGFAP04085 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.96□□□□□ -1.3
PDGFAP04085 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC6.96□□□□□ -1.3
PDGFAP04085 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC6.96□□□□□ -1.3
PDGFAP04085 UBE2FP2-201ENST00000566646 462 ntBASIC6.96□□□□□ -1.3
PDGFAP04085 AC105275.2-201ENST00000567907 711 ntBASIC6.96□□□□□ -1.3
PDGFAP04085 KPNA2P3-201ENST00000584190 848 ntBASIC6.96□□□□□ -1.3
PDGFAP04085 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.96□□□□□ -1.3
PDGFAP04085 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC6.96□□□□□ -1.3
PDGFAP04085 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC6.96□□□□□ -1.3
PDGFAP04085 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC6.96□□□□□ -1.3
PDGFAP04085 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms