Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC7.02□□□□□ -1.29
COL3A1P02461 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC7.02□□□□□ -1.29
COL3A1P02461 AC004825.1-201ENST00000555068 586 ntBASIC7.02□□□□□ -1.29
COL3A1P02461 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC7.02□□□□□ -1.29
COL3A1P02461 AC095055.1-201ENST00000603472 1113 ntBASIC7.02□□□□□ -1.29
COL3A1P02461 AL162574.1-201ENST00000615702 950 ntBASIC7.02□□□□□ -1.29
COL3A1P02461 LARS-201ENST00000274562 2213 ntTSL 2 BASIC7.02□□□□□ -1.29
COL3A1P02461 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
COL3A1P02461 AC006210.2-201ENST00000367074 1545 ntBASIC7.02□□□□□ -1.29
COL3A1P02461 AC073342.2-201ENST00000595842 1800 ntBASIC7.02□□□□□ -1.29
COL3A1P02461 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
COL3A1P02461 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL3A1P02461 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL3A1P02461 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
COL3A1P02461 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC7.01□□□□□ -1.29
COL3A1P02461 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL3A1P02461 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL3A1P02461 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL3A1P02461 AL139805.2-201ENST00000455305 2433 ntBASIC7.01□□□□□ -1.29
COL3A1P02461 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
COL3A1P02461 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.01□□□□□ -1.29
COL3A1P02461 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL3A1P02461 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
COL3A1P02461 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC7.01□□□□□ -1.29
COL3A1P02461 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
COL3A1P02461 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
COL3A1P02461 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL3A1P02461 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
COL3A1P02461 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL3A1P02461 SNORA70.6-201ENST00000383934 134 ntBASIC7.01□□□□□ -1.29
COL3A1P02461 MRM2-202ENST00000407040 582 ntTSL 3 BASIC7.01□□□□□ -1.29
COL3A1P02461 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC7.01□□□□□ -1.29
COL3A1P02461 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
COL3A1P02461 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL3A1P02461 HSPD1P12-201ENST00000429127 1069 ntBASIC7.01□□□□□ -1.29
COL3A1P02461 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC7.01□□□□□ -1.29
COL3A1P02461 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC7.01□□□□□ -1.29
COL3A1P02461 AP000797.2-201ENST00000475768 606 ntBASIC7.01□□□□□ -1.29
COL3A1P02461 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC7.01□□□□□ -1.29
COL3A1P02461 AC090058.1-201ENST00000498788 435 ntBASIC7.01□□□□□ -1.29
COL3A1P02461 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC7.01□□□□□ -1.29
COL3A1P02461 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC7.01□□□□□ -1.29
COL3A1P02461 RNU6-751P-201ENST00000516382 101 ntBASIC7.01□□□□□ -1.29
COL3A1P02461 RNU6ATAC24P-201ENST00000516811 135 ntBASIC7.01□□□□□ -1.29
COL3A1P02461 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC7.01□□□□□ -1.29
COL3A1P02461 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC7.01□□□□□ -1.29
COL3A1P02461 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC7.01□□□□□ -1.29
COL3A1P02461 AC004223.2-201ENST00000590309 544 ntBASIC7.01□□□□□ -1.29
COL3A1P02461 AC006116.3-201ENST00000592968 361 ntBASIC7.01□□□□□ -1.29
COL3A1P02461 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
COL3A1P02461 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL3A1P02461 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL3A1P02461 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL3A1P02461 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7□□□□□ -1.29
COL3A1P02461 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
COL3A1P02461 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL3A1P02461 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC7□□□□□ -1.29
COL3A1P02461 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC7□□□□□ -1.29
COL3A1P02461 MIR1182-201ENST00000408363 97 ntBASIC7□□□□□ -1.29
COL3A1P02461 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC7□□□□□ -1.29
COL3A1P02461 RPL23AP27-201ENST00000415161 451 ntBASIC7□□□□□ -1.29
COL3A1P02461 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
COL3A1P02461 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC7□□□□□ -1.29
COL3A1P02461 NPM1P22-201ENST00000427761 952 ntBASIC7□□□□□ -1.29
COL3A1P02461 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC7□□□□□ -1.29
COL3A1P02461 REG1CP-206ENST00000447469 496 ntBASIC7□□□□□ -1.29
COL3A1P02461 RPSAP50-201ENST00000481955 852 ntBASIC7□□□□□ -1.29
COL3A1P02461 SNRPCP2-201ENST00000504370 475 ntBASIC7□□□□□ -1.29
COL3A1P02461 RPS4XP20-201ENST00000505751 772 ntBASIC7□□□□□ -1.29
COL3A1P02461 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC7□□□□□ -1.29
COL3A1P02461 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC7□□□□□ -1.29
COL3A1P02461 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL3A1P02461 HMGN2P6-201ENST00000551091 273 ntBASIC7□□□□□ -1.29
COL3A1P02461 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC7□□□□□ -1.29
COL3A1P02461 AC005252.1-201ENST00000604518 1063 ntBASIC7□□□□□ -1.29
COL3A1P02461 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC7□□□□□ -1.29
COL3A1P02461 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC7□□□□□ -1.29
COL3A1P02461 AC080188.3-201ENST00000624842 748 ntBASIC7□□□□□ -1.29
COL3A1P02461 CCDC162P-202ENST00000368966 6751 ntBASIC7□□□□□ -1.29
COL3A1P02461 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL3A1P02461 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC7□□□□□ -1.29
COL3A1P02461 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL3A1P02461 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL3A1P02461 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL3A1P02461 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7□□□□□ -1.29
COL3A1P02461 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.99□□□□□ -1.29
COL3A1P02461 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.99□□□□□ -1.29
COL3A1P02461 MIR589-201ENST00000385238 99 ntBASIC6.99□□□□□ -1.29
COL3A1P02461 AL645927.1-201ENST00000396783 406 ntBASIC6.99□□□□□ -1.29
COL3A1P02461 RPL34P20-201ENST00000442771 351 ntBASIC6.99□□□□□ -1.29
COL3A1P02461 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC6.99□□□□□ -1.29
COL3A1P02461 RPL7AP6-201ENST00000477943 801 ntBASIC6.99□□□□□ -1.29
COL3A1P02461 RPS12P31-201ENST00000491419 398 ntBASIC6.99□□□□□ -1.29
COL3A1P02461 RPS24P16-201ENST00000497294 392 ntBASIC6.99□□□□□ -1.29
COL3A1P02461 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.99□□□□□ -1.29
COL3A1P02461 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.99□□□□□ -1.29
COL3A1P02461 AC044860.2-201ENST00000561005 179 ntBASIC6.99□□□□□ -1.29
COL3A1P02461 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.99□□□□□ -1.29
COL3A1P02461 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.99□□□□□ -1.29
COL3A1P02461 MIR7853-201ENST00000584820 132 ntBASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms