Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
RAPGEF3O95398 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RAPGEF3O95398 AC018809.2-201ENST00000602436 3823 ntBASIC8.28□□□□□ -1.08
RAPGEF3O95398 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
RAPGEF3O95398 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC8.28□□□□□ -1.08
RAPGEF3O95398 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RAPGEF3O95398 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
RAPGEF3O95398 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
RAPGEF3O95398 RPL32P3-201ENST00000359025 275 ntBASIC8.28□□□□□ -1.08
RAPGEF3O95398 ATP6V1G1P7-201ENST00000415853 349 ntBASIC8.28□□□□□ -1.08
RAPGEF3O95398 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC8.28□□□□□ -1.08
RAPGEF3O95398 CR848007.2-201ENST00000424918 787 ntBASIC8.28□□□□□ -1.08
RAPGEF3O95398 MTCO1P57-201ENST00000432182 261 ntBASIC8.28□□□□□ -1.08
RAPGEF3O95398 HSFY7P-201ENST00000432672 318 ntBASIC8.28□□□□□ -1.08
RAPGEF3O95398 Z85994.2-201ENST00000434327 452 ntBASIC8.28□□□□□ -1.08
RAPGEF3O95398 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
RAPGEF3O95398 HSFY8P-201ENST00000437934 318 ntBASIC8.28□□□□□ -1.08
RAPGEF3O95398 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC8.28□□□□□ -1.08
RAPGEF3O95398 NDUFAF4P2-201ENST00000445374 520 ntBASIC8.28□□□□□ -1.08
RAPGEF3O95398 HSFY5P-201ENST00000453726 309 ntBASIC8.28□□□□□ -1.08
RAPGEF3O95398 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RAPGEF3O95398 RNU6-964P-201ENST00000516524 69 ntBASIC8.28□□□□□ -1.08
RAPGEF3O95398 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC8.28□□□□□ -1.08
RAPGEF3O95398 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC8.28□□□□□ -1.08
RAPGEF3O95398 AC087468.1-201ENST00000604365 630 ntBASIC8.28□□□□□ -1.08
RAPGEF3O95398 AL713998.2-201ENST00000604538 1198 ntBASIC8.28□□□□□ -1.08
RAPGEF3O95398 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC8.28□□□□□ -1.08
RAPGEF3O95398 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
RAPGEF3O95398 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RAPGEF3O95398 MAPK10-323ENST00000641493 3207 ntBASIC8.28□□□□□ -1.08
RAPGEF3O95398 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
RAPGEF3O95398 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC8.28□□□□□ -1.08
RAPGEF3O95398 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC8.28□□□□□ -1.08
RAPGEF3O95398 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
RAPGEF3O95398 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC8.27□□□□□ -1.08
RAPGEF3O95398 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC8.27□□□□□ -1.08
RAPGEF3O95398 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
RAPGEF3O95398 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
RAPGEF3O95398 AC119674.1-213ENST00000641177 1386 ntBASIC8.27□□□□□ -1.09
RAPGEF3O95398 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
RAPGEF3O95398 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
RAPGEF3O95398 RN7SKP149-201ENST00000363008 344 ntBASIC8.27□□□□□ -1.09
RAPGEF3O95398 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC8.27□□□□□ -1.09
RAPGEF3O95398 AC015977.1-201ENST00000418887 292 ntBASIC8.27□□□□□ -1.09
RAPGEF3O95398 RPL17P35-201ENST00000432217 549 ntBASIC8.27□□□□□ -1.09
RAPGEF3O95398 MAPRE1P3-201ENST00000435438 796 ntBASIC8.27□□□□□ -1.09
RAPGEF3O95398 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC8.27□□□□□ -1.09
RAPGEF3O95398 AC012512.1-201ENST00000446594 718 ntBASIC8.27□□□□□ -1.09
RAPGEF3O95398 HMGB1P44-201ENST00000508597 572 ntBASIC8.27□□□□□ -1.09
RAPGEF3O95398 AC008628.1-201ENST00000508663 265 ntBASIC8.27□□□□□ -1.09
RAPGEF3O95398 CR383656.14-201ENST00000551951 406 ntBASIC8.27□□□□□ -1.09
RAPGEF3O95398 AC007346.2-201ENST00000564816 892 ntBASIC8.27□□□□□ -1.09
RAPGEF3O95398 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC8.27□□□□□ -1.09
RAPGEF3O95398 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC8.27□□□□□ -1.09
RAPGEF3O95398 AC008833.1-201ENST00000611633 691 ntBASIC8.27□□□□□ -1.09
RAPGEF3O95398 AC006249.1-201ENST00000621223 471 ntBASIC8.27□□□□□ -1.09
RAPGEF3O95398 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC8.27□□□□□ -1.09
RAPGEF3O95398 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
RAPGEF3O95398 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
RAPGEF3O95398 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC8.27□□□□□ -1.09
RAPGEF3O95398 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RAPGEF3O95398 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
RAPGEF3O95398 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
RAPGEF3O95398 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
RAPGEF3O95398 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
RAPGEF3O95398 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RAPGEF3O95398 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC8.27□□□□□ -1.09
RAPGEF3O95398 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RAPGEF3O95398 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
RAPGEF3O95398 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RAPGEF3O95398 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RAPGEF3O95398 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC8.26□□□□□ -1.09
RAPGEF3O95398 AC083899.2-201ENST00000423285 1376 ntBASIC8.26□□□□□ -1.09
RAPGEF3O95398 AL133243.4-201ENST00000623116 3109 ntBASIC8.26□□□□□ -1.09
RAPGEF3O95398 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RAPGEF3O95398 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC8.26□□□□□ -1.09
RAPGEF3O95398 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RAPGEF3O95398 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
RAPGEF3O95398 GJA6P-201ENST00000415117 1042 ntBASIC8.26□□□□□ -1.09
RAPGEF3O95398 AC007161.1-204ENST00000423039 460 ntBASIC8.26□□□□□ -1.09
RAPGEF3O95398 ZFAND6P1-201ENST00000434138 605 ntBASIC8.26□□□□□ -1.09
RAPGEF3O95398 AC079922.1-201ENST00000443291 359 ntBASIC8.26□□□□□ -1.09
RAPGEF3O95398 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC8.26□□□□□ -1.09
RAPGEF3O95398 AC093827.1-201ENST00000480094 861 ntBASIC8.26□□□□□ -1.09
RAPGEF3O95398 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC8.26□□□□□ -1.09
RAPGEF3O95398 IGBP1P5-201ENST00000507524 1000 ntBASIC8.26□□□□□ -1.09
RAPGEF3O95398 EIF3KP3-201ENST00000514461 639 ntBASIC8.26□□□□□ -1.09
RAPGEF3O95398 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC8.26□□□□□ -1.09
RAPGEF3O95398 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC8.26□□□□□ -1.09
RAPGEF3O95398 MTND2P13-201ENST00000577438 1039 ntBASIC8.26□□□□□ -1.09
RAPGEF3O95398 AL031320.1-201ENST00000604177 357 ntBASIC8.26□□□□□ -1.09
RAPGEF3O95398 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
RAPGEF3O95398 AL034408.1-201ENST00000637712 664 ntBASIC8.26□□□□□ -1.09
RAPGEF3O95398 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RAPGEF3O95398 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC8.26□□□□□ -1.09
RAPGEF3O95398 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
RAPGEF3O95398 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RAPGEF3O95398 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RAPGEF3O95398 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RAPGEF3O95398 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms