Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC188H7C350 AC007603.3-201ENST00000636915 979 ntBASIC5.74□□□□□ -1.49
CCDC188H7C350 AC073869.8-201ENST00000641806 335 ntBASIC5.74□□□□□ -1.49
CCDC188H7C350 TRIM51GP-201ENST00000534741 1350 ntBASIC5.74□□□□□ -1.49
CCDC188H7C350 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC188H7C350 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC188H7C350 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC188H7C350 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC188H7C350 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC188H7C350 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC188H7C350 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.74□□□□□ -1.49
CCDC188H7C350 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC188H7C350 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC188H7C350 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC188H7C350 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC188H7C350 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC188H7C350 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC188H7C350 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC188H7C350 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC188H7C350 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC188H7C350 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC188H7C350 AC003973.3-201ENST00000624863 2822 ntBASIC5.73□□□□□ -1.49
CCDC188H7C350 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC188H7C350 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC188H7C350 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC188H7C350 AL353625.1-202ENST00000366273 571 ntBASIC5.73□□□□□ -1.49
CCDC188H7C350 AC007618.1-201ENST00000366455 732 ntBASIC5.73□□□□□ -1.49
CCDC188H7C350 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC188H7C350 RNU2-18P-201ENST00000411224 162 ntBASIC5.73□□□□□ -1.49
CCDC188H7C350 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC188H7C350 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC188H7C350 AJ239321.1-201ENST00000424255 564 ntBASIC5.73□□□□□ -1.49
CCDC188H7C350 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CCDC188H7C350 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC188H7C350 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CCDC188H7C350 PNKDP1-201ENST00000435914 430 ntBASIC5.73□□□□□ -1.49
CCDC188H7C350 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.73□□□□□ -1.49
CCDC188H7C350 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC188H7C350 RSL24D1P2-201ENST00000445584 366 ntBASIC5.73□□□□□ -1.49
CCDC188H7C350 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC188H7C350 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC188H7C350 AC009963.3-201ENST00000458090 486 ntBASIC5.73□□□□□ -1.49
CCDC188H7C350 AC021660.1-201ENST00000465006 554 ntBASIC5.73□□□□□ -1.49
CCDC188H7C350 RN7SL583P-201ENST00000475692 287 ntBASIC5.73□□□□□ -1.49
CCDC188H7C350 AC093827.1-201ENST00000480094 861 ntBASIC5.73□□□□□ -1.49
CCDC188H7C350 RPS12P31-201ENST00000491419 398 ntBASIC5.73□□□□□ -1.49
CCDC188H7C350 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC188H7C350 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CCDC188H7C350 AC009268.1-201ENST00000561352 1203 ntBASIC5.73□□□□□ -1.49
CCDC188H7C350 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CCDC188H7C350 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC188H7C350 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC188H7C350 FAM27E4-201ENST00000605259 342 ntBASIC5.73□□□□□ -1.49
CCDC188H7C350 RPL12P48-201ENST00000605620 304 ntBASIC5.73□□□□□ -1.49
CCDC188H7C350 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC188H7C350 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC188H7C350 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC188H7C350 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC188H7C350 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC188H7C350 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC188H7C350 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC188H7C350 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC188H7C350 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC188H7C350 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC188H7C350 AC073136.1-201ENST00000449426 2884 ntBASIC5.73□□□□□ -1.49
CCDC188H7C350 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
CCDC188H7C350 AC003985.2-201ENST00000562268 1669 ntBASIC5.72□□□□□ -1.49
CCDC188H7C350 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC188H7C350 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC188H7C350 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC188H7C350 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC188H7C350 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC188H7C350 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.72□□□□□ -1.49
CCDC188H7C350 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC188H7C350 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC188H7C350 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC188H7C350 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC188H7C350 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
CCDC188H7C350 GCNT1P4-201ENST00000404096 329 ntBASIC5.72□□□□□ -1.49
CCDC188H7C350 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC188H7C350 GAPDHP34-201ENST00000432112 823 ntBASIC5.72□□□□□ -1.49
CCDC188H7C350 AC006335.2-201ENST00000437993 330 ntBASIC5.72□□□□□ -1.49
CCDC188H7C350 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC188H7C350 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.72□□□□□ -1.49
CCDC188H7C350 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC188H7C350 MYL12BP2-201ENST00000503948 512 ntBASIC5.72□□□□□ -1.49
CCDC188H7C350 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC188H7C350 AC112484.3-201ENST00000505910 329 ntBASIC5.72□□□□□ -1.49
CCDC188H7C350 RNU6-319P-201ENST00000516025 108 ntBASIC5.72□□□□□ -1.49
CCDC188H7C350 AP001000.1-201ENST00000526843 742 ntBASIC5.72□□□□□ -1.49
CCDC188H7C350 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.72□□□□□ -1.49
CCDC188H7C350 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
CCDC188H7C350 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC188H7C350 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC188H7C350 AC022387.2-201ENST00000604050 448 ntBASIC5.72□□□□□ -1.49
CCDC188H7C350 MIR6889-201ENST00000613185 59 ntBASIC5.72□□□□□ -1.49
CCDC188H7C350 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC188H7C350 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC188H7C350 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC188H7C350 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms