Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC235565.1-201ENST00000456962 1325 ntBASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 MRRFP1-201ENST00000435941 1675 ntBASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC003985.2-201ENST00000562268 1669 ntBASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC130304.1-201ENST00000622942 2385 ntBASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 PABPC1P6-201ENST00000445594 1829 ntBASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 MIR937-201ENST00000401271 86 ntBASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 METTL15P3-201ENST00000415522 1221 ntBASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 NIFKP3-201ENST00000417799 865 ntBASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 NANOGP4-201ENST00000427230 913 ntBASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 RN7SL172P-201ENST00000460535 303 ntBASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 RPL35AP19-201ENST00000469425 329 ntBASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 RPL32P9-201ENST00000487963 407 ntBASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC105420.1-201ENST00000504389 582 ntBASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 IGLV3-30-201ENST00000524362 298 ntBASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 MRPS21P7-201ENST00000566937 238 ntBASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 PPATP2-201ENST00000605635 508 ntBASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 MIR7155-201ENST00000615925 56 ntBASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 AL589935.2-201ENST00000616471 1231 ntBASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC119674.1-217ENST00000641942 1086 ntBASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 C4BPAP1-201ENST00000415474 1893 ntBASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TMX2-CTNND1H3BSU7 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC068870.3-201ENST00000625077 2536 ntBASIC5.46□□□□□ -1.53
TMX2-CTNND1H3BSU7 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.53
TMX2-CTNND1H3BSU7 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
TMX2-CTNND1H3BSU7 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC020633.1-201ENST00000468439 2247 ntBASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 SNORA58B-201ENST00000364259 136 ntBASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC096775.1-201ENST00000437724 448 ntBASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 AL450023.1-201ENST00000450868 751 ntBASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 RPL7P45-201ENST00000455851 743 ntBASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 RN7SL515P-201ENST00000463999 297 ntBASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC231760.1-201ENST00000498002 260 ntBASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC090638.1-201ENST00000498296 909 ntBASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 AL121594.2-201ENST00000541658 472 ntBASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 AL163952.1-202ENST00000569625 600 ntBASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 LSM1P2-201ENST00000604911 322 ntBASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 NANOGP3-201ENST00000605855 286 ntBASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC015712.7-201ENST00000615211 635 ntBASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 AL355974.3-201ENST00000617383 467 ntBASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC132068.1-201ENST00000623805 459 ntBASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC073429.2-201ENST00000569694 1444 ntBASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 204.1 ms