Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 RPL36AP10-201ENST00000421785 322 ntBASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 AL031584.1-201ENST00000447169 754 ntBASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 RN7SL39P-201ENST00000462264 297 ntBASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 RPS7P10-201ENST00000464254 603 ntBASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 AC099521.1-201ENST00000482557 334 ntBASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 RN7SL649P-201ENST00000496974 275 ntBASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 NACAP5-201ENST00000509863 636 ntBASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 RN7SKP46-201ENST00000515942 234 ntBASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 SCARNA20.4-201ENST00000516969 131 ntBASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 OR1E3-201ENST00000575608 948 ntBASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 STARD6-202ENST00000577499 696 ntTSL 2 BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 AC022884.2-201ENST00000578535 580 ntBASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 AC138207.8-204ENST00000579588 527 ntBASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 AL161912.3-201ENST00000605404 628 ntBASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 OSTC-205ENST00000613215 876 ntTSL 2 BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 GAPDHP41-201ENST00000613707 975 ntBASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 AL356752.1-201ENST00000615844 593 ntBASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 BX005214.3-202ENST00000619809 325 ntBASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 AC021242.1-201ENST00000507315 2035 ntBASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 CUL4AP1-201ENST00000514750 1863 ntBASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 MTCO1P15-201ENST00000529569 1526 ntBASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 RBPJP5-201ENST00000449433 1447 ntBASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 SELENOWP1-201ENST00000322792 252 ntBASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 SNORA21-201ENST00000362423 132 ntBASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 YWHAZP4-201ENST00000392459 708 ntBASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 AC013442.1-201ENST00000397347 228 ntBASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 RNU2-18P-201ENST00000411224 162 ntBASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 NIFKP3-201ENST00000417799 865 ntBASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 AL645936.1-201ENST00000441979 518 ntBASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 AC002553.3-201ENST00000453002 341 ntBASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 RPS27P20-201ENST00000492051 246 ntBASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 RPS24P16-201ENST00000497294 392 ntBASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 RNA5SP303-201ENST00000516192 130 ntBASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 FAU-203ENST00000525297 355 ntTSL 5 BASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 AC135983.3-201ENST00000528049 1226 ntBASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 AC091078.2-201ENST00000557145 559 ntBASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 AC011840.5-201ENST00000582125 771 ntBASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC4.31□□□□□ -1.72
RBFOX3A6NFN3 QTRT1P1-201ENST00000604344 1078 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms