Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 RANP5-201ENST00000427731 655 ntBASIC6.17□□□□□ -1.42
SHISA3A0PJX4 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 AC245452.2-201ENST00000435222 392 ntBASIC6.17□□□□□ -1.42
SHISA3A0PJX4 RPL7P29-201ENST00000437151 728 ntBASIC6.17□□□□□ -1.42
SHISA3A0PJX4 AL021939.1-201ENST00000441868 886 ntBASIC6.17□□□□□ -1.42
SHISA3A0PJX4 RPS26P30-201ENST00000443431 335 ntBASIC6.17□□□□□ -1.42
SHISA3A0PJX4 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 MTND3P10-201ENST00000450967 341 ntBASIC6.17□□□□□ -1.42
SHISA3A0PJX4 BZW1P1-201ENST00000454901 1240 ntBASIC6.17□□□□□ -1.42
SHISA3A0PJX4 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 AC110749.1-201ENST00000462007 357 ntBASIC6.17□□□□□ -1.42
SHISA3A0PJX4 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 RPS4XP15-201ENST00000489210 795 ntBASIC6.17□□□□□ -1.42
SHISA3A0PJX4 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 RPL7P24-201ENST00000493052 752 ntBASIC6.17□□□□□ -1.42
SHISA3A0PJX4 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 GAPDHP31-201ENST00000509325 1014 ntBASIC6.17□□□□□ -1.42
SHISA3A0PJX4 CDC42P3-201ENST00000518493 633 ntBASIC6.17□□□□□ -1.42
SHISA3A0PJX4 OR5AK1P-201ENST00000524837 922 ntBASIC6.17□□□□□ -1.42
SHISA3A0PJX4 AC055736.1-201ENST00000548135 629 ntTSL 3 BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 GTF2IP8-201ENST00000560687 584 ntBASIC6.17□□□□□ -1.42
SHISA3A0PJX4 RN7SL835P-201ENST00000579920 262 ntBASIC6.17□□□□□ -1.42
SHISA3A0PJX4 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 AC126175.1-201ENST00000617041 758 ntBASIC6.17□□□□□ -1.42
SHISA3A0PJX4 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 AC004836.1-201ENST00000623032 634 ntBASIC6.17□□□□□ -1.42
SHISA3A0PJX4 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 NBPF8-201ENST00000583271 5330 ntBASIC6.17□□□□□ -1.42
SHISA3A0PJX4 PABPC1P9-201ENST00000426076 1612 ntBASIC6.17□□□□□ -1.42
SHISA3A0PJX4 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 ICE2P1-201ENST00000512800 1849 ntBASIC6.16□□□□□ -1.42
SHISA3A0PJX4 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AC034229.2-201ENST00000566945 2508 ntBASIC6.16□□□□□ -1.42
SHISA3A0PJX4 SMR3A-201ENST00000226460 665 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 RNU6-501P-201ENST00000364072 100 ntBASIC6.16□□□□□ -1.42
SHISA3A0PJX4 RNU6-374P-201ENST00000364146 108 ntBASIC6.16□□□□□ -1.42
SHISA3A0PJX4 Y_RNA.554-201ENST00000384672 102 ntBASIC6.16□□□□□ -1.42
SHISA3A0PJX4 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AC092952.1-201ENST00000397646 1209 ntBASIC6.16□□□□□ -1.42
SHISA3A0PJX4 RNU2-41P-201ENST00000410991 178 ntBASIC6.16□□□□□ -1.42
SHISA3A0PJX4 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AL355862.1-201ENST00000412705 353 ntBASIC6.16□□□□□ -1.42
SHISA3A0PJX4 USP9YP6-201ENST00000413550 854 ntBASIC6.16□□□□□ -1.42
SHISA3A0PJX4 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AL109913.1-201ENST00000421173 514 ntBASIC6.16□□□□□ -1.42
SHISA3A0PJX4 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 SLIT1-AS1-201ENST00000424428 689 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 TRBV10-2-201ENST00000426318 395 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AF274573.1-201ENST00000430535 494 ntBASIC6.16□□□□□ -1.42
SHISA3A0PJX4 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 HMGN2P24-201ENST00000433516 273 ntBASIC6.16□□□□□ -1.42
SHISA3A0PJX4 UBE2FP3-201ENST00000436366 524 ntBASIC6.16□□□□□ -1.42
SHISA3A0PJX4 TRIM60P16-201ENST00000444048 694 ntBASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AL591438.2-201ENST00000452635 691 ntBASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AC098824.1-201ENST00000453565 980 ntBASIC6.16□□□□□ -1.42
SHISA3A0PJX4 USP9YP34-201ENST00000453983 808 ntBASIC6.16□□□□□ -1.42
SHISA3A0PJX4 PSMC1P13-201ENST00000458195 985 ntBASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AL121769.1-201ENST00000469473 401 ntBASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AC117392.1-201ENST00000487061 596 ntBASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AC023424.2-201ENST00000493479 777 ntBASIC6.16□□□□□ -1.42
SHISA3A0PJX4 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 LINC01085-203ENST00000511195 326 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms