Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 AC104634.1-201ENST00000452720 462 ntBASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 RPS18P6-201ENST00000476880 458 ntBASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 RN7SL423P-201ENST00000486202 304 ntBASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 RPL15P21-201ENST00000495592 567 ntBASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 KATNBL1P4-201ENST00000503545 918 ntBASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 SNRPCP2-201ENST00000504370 475 ntBASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 RPS4XP20-201ENST00000505751 772 ntBASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 OR4A17P-201ENST00000526032 904 ntBASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 uc_338.7-201ENST00000621834 124 ntBASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 ZNF733P-202ENST00000444809 1573 ntBASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 RPL23AP27-201ENST00000415161 451 ntBASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 RPL7P40-201ENST00000481703 745 ntBASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 AC008410.1-201ENST00000483777 339 ntBASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 AC079064.1-201ENST00000528365 362 ntBASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 AC022832.1-201ENST00000530718 645 ntBASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 MIR4443-201ENST00000585052 53 ntBASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 AC095055.1-201ENST00000603472 1113 ntBASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 AC092944.2-201ENST00000605443 889 ntBASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 AC093388.1-201ENST00000609166 430 ntBASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 AL121612.2-201ENST00000612261 482 ntBASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 AL360270.2-201ENST00000562952 5985 ntBASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 AC100757.1-201ENST00000616872 1835 ntBASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 XKRY2-202ENST00000623874 1581 ntBASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 XKRY-202ENST00000624960 1581 ntBASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SMIM28A0A1B0GU29 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 AC078880.4-201ENST00000617627 1749 ntBASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 SNORA58B-201ENST00000364259 136 ntBASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 MIR765-201ENST00000390226 114 ntBASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 AC021876.1-201ENST00000425959 359 ntBASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 BX284632.1-201ENST00000478218 541 ntBASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms