Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 RN7SKP128-201ENST00000364270 303 ntBASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 RNU105B-201ENST00000364478 208 ntBASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 AC016739.1-201ENST00000405359 345 ntBASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 RNU4-27P-201ENST00000410889 139 ntBASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 RPL35AP3-201ENST00000414680 288 ntBASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 RPS15AP30-201ENST00000420976 390 ntBASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 MTND2P2-201ENST00000434633 945 ntBASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 SUMO2P3-201ENST00000438311 288 ntBASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 AC092967.1-201ENST00000449016 481 ntBASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 RN7SL269P-201ENST00000467795 305 ntBASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 AC023245.1-201ENST00000468501 517 ntBASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 AC008410.1-201ENST00000483777 339 ntBASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 AC112518.2-201ENST00000508565 425 ntBASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 AP001372.4-201ENST00000524889 472 ntBASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 AC106730.2-201ENST00000566641 540 ntBASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 AC027229.1-201ENST00000583887 253 ntBASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 AL589674.2-201ENST00000604304 337 ntBASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 AL159169.2-201ENST00000610061 1269 ntBASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 OR8G7P-201ENST00000616658 848 ntBASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 AL137067.2-201ENST00000621202 131 ntBASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 AL662795.2-201ENST00000624252 3706 ntBASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 AL645568.2-201ENST00000432815 1337 ntBASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 OLMALINC-203ENST00000641087 3779 ntBASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 AL672167.2-201ENST00000377164 879 ntBASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 RN7SKP278-201ENST00000410504 342 ntBASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 OR2AT2P-201ENST00000413438 905 ntBASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 RPL23AP18-201ENST00000416139 468 ntBASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 AC013262.1-201ENST00000426710 252 ntBASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 AC126120.1-201ENST00000431082 470 ntBASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 RAB28P2-201ENST00000454299 641 ntBASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 AC098583.1-201ENST00000480875 255 ntBASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 RN7SL57P-201ENST00000493687 290 ntBASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 UBE2V1P12-201ENST00000503954 474 ntBASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 IGKV2-19-201ENST00000518132 283 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms